Assay Details
Target Gene Details
Entrez Gene ID: | 80313 |
Gene Name: | leucine rich repeat containing 27 |
Gene Aliases: |
- |
Location: |
Chr.10:132330063-132381506 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LRRC27 | NM_001143757.1 | 3 | 619 | NP_001137229.1 |
NM_001143758.1 | 3 | 466 | NP_001137230.1 | |
NM_001143759.1 | 3 | 466 | NP_001137231.1 | |
NM_001309474.1 | 2 | 376 | NP_001296403.1 | |
NM_030626.2 | 3 | 466 | NP_085129.1 | |
XM_006717983.2 | 3 | 779 | XP_006718046.1 | |
XM_006717984.2 | 3 | 466 | XP_006718047.1 | |
XM_011540208.1 | 3 | 549 | XP_011538510.1 | |
XM_011540209.1 | 3 | 466 | XP_011538511.1 | |
XM_011540210.2 | 2 | 374 | XP_011538512.1 | |
XM_017016690.1 | 3 | 466 | XP_016872179.1 | |
XM_017016691.1 | 3 | 466 | XP_016872180.1 | |
XM_017016692.1 | 3 | 466 | XP_016872181.1 | |
XM_017016693.1 | 3 | 466 | XP_016872182.1 | |
XM_017016694.1 | 3 | 412 | XP_016872183.1 | |
AB051461.1 | 3 | 376 | ||
AK093250.1 | 3 | 232 | BAC04108.1 | |
AK097418.1 | 3 | 577 | ||
AK098652.1 | 3 | 422 | BAC05366.1 | |
AK295953.1 | 3 | 383 | ||
AK301422.1 | 2 | 143 | ||
BC050097.1 | 3 | 421 | AAH50097.1 | |
DA658738.1 | 3 | 466 | ||
DC352688.1 | 2 | 377 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1054569 | Chr.10:132009350 - 132351508 on Build GRCh38 | Gain | LRRC27 JAKMIP3 STK32C DPYSL4 |
nsv1051555 | Chr.10:132295188 - 132415461 on Build GRCh38 | Gain | PWWP2B LRRC27 STK32C |
esv3624986 | Chr.10:132322882 - 132551350 on Build GRCh38 | Gain | PWWP2B LRRC27 STK32C LOC105378568 C10orf91 LOC107984282 INPP5A |
esv2761642 | Chr.10:132048518 - 132365985 on Build GRCh38 | Gain | LRRC27 JAKMIP3 STK32C DPYSL4 |
nsv1054934 | Chr.10:130334322 - 133158679 on Build GRCh38 | Gain | ADGRA1 CFAP46 ADGRA1-AS1 DPYSL4 INPP5A TCERG1L TCERG1L-AS1 PPP2R2D PWWP2B LRRC27 JAKMIP3 STK32C LOC105378568 MIR378C C10orf91 NKX6-2 LINC01168 LOC107984282 LINC01166 LINC01167 BNIP3 LINC01164 |
nsv1052405 | Chr.10:132336481 - 132390781 on Build GRCh38 | Gain | LRRC27 |
More Information
Additional Information:
For this assay, SNP(s) [rs116451295] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |