Assay Details
Target Gene Details
Entrez Gene ID: | 283232 |
Gene Name: | transmembrane protein 80 |
Gene Aliases: |
- |
Location: |
Chr.11:695386-705028 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 5 - Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TMEM80 | NM_001042463.2 | NP_001035928.2 | ||
NM_001276253.1 | NP_001263182.1 | |||
NM_001276274.1 | NP_001263203.1 | |||
NM_174940.3 | NP_777600.3 | |||
XM_006718206.3 | XP_006718269.3 | |||
XM_017017600.1 | XP_016873089.1 | |||
AI739035.1 | ||||
AK124309.1 | ||||
AK302585.1 | ||||
BC008671.1 | ||||
CA443683.1 | ||||
CB044312.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv522733 | Chr.11:702250 - 752059 on Build GRCh38 | Loss | TMEM80 TALDO1 EPS8L2 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | SNORA52 TSPAN4 CD151 POLR2L AP2A2 LOC101059906 RNH1 CHID1 LOC143666 CEND1 PANO1 SCT LMNTD2 SIGIRR RASSF7 MUC6 MUC5B MIR210 TOLLIP CRACR2B CDHR5 PIDD1 PNPLA2 PTDSS2 B4GALNT4 MIR6744 SLC25A22 MUC5AC MUC2 IRF7 LRRC56 DRD4 LOC101927503 TMEM80 DEAF1 RPLP2 TALDO1 MIR210HG ANO9 PKP3 EPS8L2 PHRF1 HRAS LOC171391 PDDC1 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | TMEM80 DEAF1 TALDO1 EPS8L2 DRD4 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | SNORA52 TSPAN4 CD151 POLR2L AP2A2 LOC101059906 RNH1 CHID1 LOC143666 CEND1 PANO1 SCT LMNTD2 SIGIRR RASSF7 MUC6 MUC5B MIR210 TOLLIP CRACR2B CDHR5 PIDD1 PNPLA2 PTDSS2 MIR6744 SLC25A22 MUC5AC MUC2 IRF7 LRRC56 DRD4 LOC101927503 TMEM80 DEAF1 RPLP2 TOLLIP-AS1 TALDO1 MIR210HG ANO9 EPS8L2 PHRF1 HRAS LOC171391 PDDC1 |
nsv552869 | Chr.11:702097 - 727446 on Build GRCh38 | Loss | TMEM80 EPS8L2 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | SNORA52 TSPAN4 CD151 POLR2L AP2A2 LOC101059906 RNH1 CHID1 LOC143666 CEND1 PANO1 SCT LMNTD2 SIGIRR RASSF7 MIR210 CRACR2B CDHR5 PIDD1 PNPLA2 PTDSS2 B4GALNT4 SLC25A22 IRF7 LRRC56 DRD4 TMEM80 DEAF1 RPLP2 TALDO1 MIR210HG ANO9 PKP3 EPS8L2 PHRF1 HRAS LOC171391 PDDC1 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | SNORA52 TSPAN4 CD151 POLR2L LOC101059906 RNH1 CHID1 LOC143666 CEND1 PANO1 SCT LMNTD2 RASSF7 MIR210 CRACR2B CDHR5 PIDD1 PNPLA2 PTDSS2 SLC25A22 IRF7 LRRC56 DRD4 TMEM80 DEAF1 RPLP2 TALDO1 MIR210HG EPS8L2 PHRF1 HRAS LOC171391 PDDC1 |