Assay Details
Target Gene Details
Entrez Gene ID: | 100289580 |
Gene Name: | uncharacterized LOC100289580 |
Gene Aliases: |
- |
Location: |
Chr.16:88731180-88741425 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC100289580 | NR_103774.1 | |||
AK127064.1 | 1 | 810 | ||
AK294743.1 |
Target Gene Details
Entrez Gene ID: | 9780 |
Gene Name: | piezo type mechanosensitive ion channel component 1 |
Gene Aliases: |
DHS, FAM38A, LMPH3, Mib |
Location: |
Chr.16:88715338-88785220 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 10 - Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PIEZO1 | NM_001142864.3 | NP_001136336.2 | ||
AA682915.1 | ||||
KC602455.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1063024 | Chr.16:88707330 - 89238482 on Build GRCh38 | Gain | APRT CDH15 ACSF3 LOC101927793 CTU2 CDT1 LOC400558 LOC107987238 LOC339059 LOC100289580 GALNS LINC00304 ZNF778 LOC105371409 CBFA2T3 MIR4722 PIEZO1 PABPN1L LOC100129697 TRAPPC2L SLC22A31 |
nsv471114 | Chr.16:88688461 - 88756339 on Build GRCh38 | Gain | CTU2 MIR4722 PIEZO1 LOC339059 LOC100289580 RNF166 |
nsv471113 | Chr.16:88650665 - 88764428 on Build GRCh38 | Loss | SNAI3 CYBA MVD CTU2 MIR4722 PIEZO1 SNAI3-AS1 LOC339059 LOC100289580 RNF166 |
dgv3064n100 | Chr.16:88683753 - 88846491 on Build GRCh38 | Gain | GALNS APRT SNAI3 CTU2 MIR4722 PIEZO1 CDT1 SNAI3-AS1 LOC107987238 LOC339059 LOC100289580 RNF166 |
nsv517643 | Chr.16:88713767 - 88756339 on Build GRCh38 | Loss | CTU2 MIR4722 PIEZO1 LOC339059 LOC100289580 |
nsv833327 | Chr.16:88667431 - 88757621 on Build GRCh38 | Loss | SNAI3 CTU2 MIR4722 PIEZO1 SNAI3-AS1 LOC339059 LOC100289580 RNF166 |
nsv952070 | Chr.16:88257295 - 88780192 on Build GRCh38 | Deletion | SNAI3 MVD MIR5189 CTU2 ZC3H18-AS1 ZFPM1 SNAI3-AS1 ZC3H18 LOC339059 LOC100289580 RNF166 IL17C CYBA LOC107984862 ZNF469 MIR4722 PIEZO1 |
nsv1927 | Chr.16:88712585 - 88743583 on Build GRCh38 | Insertion | CTU2 MIR4722 PIEZO1 LOC339059 LOC100289580 |
nsv1160442 | Chr.16:88708161 - 88778524 on Build GRCh38 | Deletion | CTU2 MIR4722 PIEZO1 LOC339059 LOC100289580 |
nsv482951 | Chr.16:88633593 - 90228345 on Build GRCh38 | Loss | CDH15 ACSF3 VPS9D1 CTU2 MC1R CDT1 LOC100289580 RNF166 TCF25 LINC00304 AFG3L1P LOC105371409 LOC107984817 ZNF276 VPS9D1-AS1 LOC100129697 LOC100287036 SLC22A31 ANKRD11 DPEP1 LOC400558 LOC105371419 LOC107987238 DBNDD1 TUBB8P7 CBFA2T3 PABPN1L SPATA33 TRAPPC2L APRT LOC105371414 SNAI3 LOC101927793 SPATA2L CDK10 SNAI3-AS1 LOC339059 IL17C FAM157C GALNS GAS8-AS1 DEF8 GAS8 ZNF778 CYBA CPNE7 PRDM7 LOC101927817 SNORD68 URAHP MVD SPG7 RPL13 CHMP1A MIR4722 PIEZO1 FANCA SPIRE2 TUBB3 CENPBD1 |
dgv3065n100 | Chr.16:88711587 - 88927172 on Build GRCh38 | Gain | APRT LOC101927793 CTU2 CDT1 LOC107987238 LOC339059 LOC100289580 GALNS CBFA2T3 MIR4722 PIEZO1 PABPN1L TRAPPC2L |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |