Assay Details
Target Gene Details
Entrez Gene ID: | 10732 |
Gene Name: | transcription factor like 5 |
Gene Aliases: |
CHA, E2BP-1, Figlb, bHLHe82 |
Location: |
Chr.20:62841014-62861763 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TCFL5 | NM_006602.3 | 6 | 2210 | NP_006593.2 |
XM_005260185.3 | 6 | 2114 | XP_005260242.1 | |
AB012124.1 | 6 | 2071 | BAA36557.1 | |
AF070992.1 | 6 | 2048 | AAD53986.1 | |
CA419503.1 | 1 | 366 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834027 | Chr.20:62707655 - 62874914 on Build GRCh38 | Loss | LOC107987285 LOC107985428 LINC00659 MRGBP OGFR-AS1 COL9A3 OGFR DPH3P1 TCFL5 NTSR1 |
nsv828794 | Chr.20:62832958 - 62880035 on Build GRCh38 | Loss | COL9A3 DIDO1 DPH3P1 TCFL5 |
nsv9825 | Chr.20:62775470 - 63601330 on Build GRCh38 | Gain | LOC100130152 GID8 LOC107985428 LOC107985425 GMEB2 KCNQ2 YTHDF1 COL9A3 OGFR DIDO1 SRMS TCFL5 PTK6 CHRNA4 PPDPF LOC102723788 HAR1B MIR124-3 LINC00659 FLJ16779 FNDC11 BHLHE23 SLC17A9 MIR4326 OGFR-AS1 DPH3P1 COL20A1 MIR3196 ARFGAP1 HAR1A HELZ2 BIRC7 EEF1A2 LINC00029 MRGBP LINC01056 NKAIN4 LOC100130587 LOC63930 |
nsv428380 | Chr.20:62632018 - 62935383 on Build GRCh38 | Loss | LOC107985428 SLCO4A1 OGFR-AS1 COL9A3 OGFR DIDO1 DPH3P1 TCFL5 NTSR1 LOC107987285 LINC00659 SLCO4A1-AS1 MRGBP |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |