Assay Details
Target Gene Details
Entrez Gene ID: | 1088 |
Gene Name: | carcinoembryonic antigen related cell adhesion molecule 8 |
Gene Aliases: |
CD66b, CD67, CGM6, NCA-95 |
Location: |
Chr.19:42580243-42595016 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CEACAM8 | NM_001816.3 | 4 | 1008 | NP_001807.2 |
XM_011526340.2 | 4 | 1008 | XP_011524642.1 | |
XM_011526341.1 | XP_011524643.1 | |||
XM_011526342.1 | XP_011524644.1 | |||
XM_017026194.1 | 4 | 1008 | XP_016881683.1 | |
XM_017026195.1 | 4 | 1008 | XP_016881684.1 | |
XM_017026196.1 | 4 | 1008 | XP_016881685.1 | |
XM_017026197.1 | 3 | 734 | XP_016881686.1 | |
XM_017026198.1 | XP_016881687.1 | |||
AK297012.1 | 4 | 697 | ||
AK312652.1 | 4 | 1005 | ||
BC026263.1 | 4 | 976 | AAH26263.1 | |
D90064.1 | 4 | 992 | BAA14108.1 | |
M33326.1 | 4 | 992 | AAA59914.1 | |
X52378.1 | 4 | 938 | CAA36604.1 |
Target Gene Details
Entrez Gene ID: | 100996307 |
Gene Name: | LIPE antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.19:42397148-42652355 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LIPE-AS1 | NR_073179.1 | |||
NR_073180.1 | ||||
AK096849.1 | BAC04875.1 | |||
AK310497.1 | ||||
AK311181.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3583425 | Chr.19:42585804 - 42670004 on Build GRCh38 | Loss | CEACAM8 LIPE-AS1 |
nsv1064734 | Chr.19:42571894 - 42678326 on Build GRCh38 | Gain | CEACAM8 LIPE-AS1 |
nsv1058936 | Chr.19:42578696 - 42724009 on Build GRCh38 | Gain | PSG3 CEACAM8 LIPE-AS1 |
esv2758763 | Chr.19:42538595 - 43394901 on Build GRCh38 | Gain+Loss | PRG1 PSG11 PSG9 TEX101 CD177 PSG5 PSG2 CEACAM8 PSG6 PSG1 LOC284344 PSG8 PSG4 PSG3 PSG7 LIPE-AS1 LOC100289650 PSG10P |
nsv526186 | Chr.19:42172329 - 42699355 on Build GRCh38 | Gain | LIPE CNFN CXCL17 ERF GSK3A CEACAM8 PAFAH1B3 DEDD2 CEACAM1 POU2F2 MEGF8 ZNF526 CIC TMEM145 LOC101930071 PRR19 MIR8077 LIPE-AS1 |
nsv978823 | Chr.19:42577206 - 42590553 on Build GRCh38 | Duplication | CEACAM8 LIPE-AS1 |
nsv482221 | Chr.19:42580243 - 42594930 on Build GRCh38 | Gain | CEACAM8 LIPE-AS1 |
dgv15e196 | Chr.19:42487137 - 43165333 on Build GRCh38 | Deletion | CEACAM1 PSG8 PSG11 PSG3 PSG2 CEACAM8 PSG7 PSG6 LIPE-AS1 PSG1 LOC100289650 PSG10P |
esv2422471 | Chr.19:42228989 - 43165333 on Build GRCh38 | Deletion | LIPE PSG11 CNFN CXCL17 ERF PSG2 GSK3A CEACAM8 PSG6 PAFAH1B3 PSG1 CEACAM1 PSG8 PSG3 MEGF8 CIC TMEM145 LOC101930071 PRR19 PSG7 MIR8077 LIPE-AS1 LOC100289650 PSG10P |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |