Assay Details
Target Gene Details
Entrez Gene ID: | 84941 |
Gene Name: | hematopoietic SH2 domain containing |
Gene Aliases: |
ALX, HSH2 |
Location: |
Chr.19:16134028-16158575 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HSH2D | NM_001291274.1 | 8 | 2016 | NP_001278203.1 |
NM_032855.3 | 8 | 1483 | NP_116244.1 | |
NR_111903.1 | 8 | 1490 | ||
XM_011528386.2 | 7 | 1237 | XP_011526688.1 | |
XM_011528387.2 | 7 | 1239 | XP_011526689.1 | |
XM_011528388.2 | 8 | 1317 | XP_011526690.1 | |
XM_011528389.2 | 6 | 1104 | XP_011526691.1 | |
XM_017027402.1 | 6 | 2637 | XP_016882891.1 | |
XM_017027403.1 | 7 | 1191 | XP_016882892.1 | |
XM_017027404.1 | 6 | 1075 | XP_016882893.1 | |
AK027792.1 | 6 | 1063 | BAB55372.1 | |
AK131222.1 | 6 | 1596 | BAD18408.1 | |
AK307563.1 | 6 | 1033 | ||
AY319652.1 | 8 | 1483 | AAQ81285.1 | |
BC016826.1 | 4 | 688 | AAH16826.1 | |
BC025237.2 | 5 | 983 | AAH25237.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3643791 | Chr.19:16149438 - 16170044 on Build GRCh38 | Loss | CIB3 HSH2D |
nsv833767 | Chr.19:16121391 - 16347760 on Build GRCh38 | Loss | AP1M1 FAM32A RAB8A KLF2 CIB3 HSH2D |
More Information
Additional Information:
For this assay, SNP(s) [rs114192722] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |