Assay Details
Target Gene Details
Entrez Gene ID: | 9146 |
Gene Name: | hepatocyte growth factor-regulated tyrosine kinase substrate |
Gene Aliases: |
HRS |
Location: |
Chr.17:81683932-81702121 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 6 - Intron 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HGS | NM_004712.4 | NP_004703.1 | ||
XM_011525463.2 | XP_011523765.1 | |||
XM_017025297.1 | XP_016880786.1 | |||
XM_017025298.1 | XP_016880787.1 | |||
AF260566.1 | AAF82361.1 | |||
AK294190.1 | ||||
AK303800.1 | ||||
BC003565.1 | AAH03565.1 | |||
BT009754.1 | AAP88756.1 | |||
D84064.1 | BAA23366.1 | |||
DR001213.1 | ||||
KU178466.1 | ||||
KU178467.1 | ||||
U43895.1 | AAC51929.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv26223 | Chr.17:80659041 - 81736487 on Build GRCh38 | Gain+Loss | BAHCC1 SLC25A10 BAIAP2-AS1 TEPSIN HGS FAAP100 LOC100129503 PDE6G NPLOC4 LOC400627 MIR3186 MIR338 TSPAN10 TMEM105 CCDC137 OXLD1 C17orf89 AATK AATK-AS1 CHMP6 LOC105371921 LINC00482 MIR1250 FSCN2 CEP131 BAIAP2 LOC105371925 LOC101928855 MIR3065 MIR4740 LOC107985022 MRPL12 RPTOR MIR657 LOC100130370 MIR6786 ARL16 SLC38A10 LOC107985021 ACTG1 |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | SLC25A10 TEX19 HGS PCYT2 UTS2R FOXK2 WDR45B PDE6G HEXDC GPS1 MIR4525 MAFG P4HB MIR6787 NPLOC4 MIR3186 LOC101929552 PPP1R27 ANAPC11 NPB SIRT7 LOC105371944 OXLD1 C17orf89 AATK AATK-AS1 OGFOD3 ALYREF LOC101929511 LOC105376790 LINC00482 CEP131 FN3KRP ARHGDIA ASPSCR1 MIR4740 B3GNTL1 CSNK1D RAB40B LOC100130370 SECTM1 MIR6786 CCDC57 ACTG1 SNORD134 BAHCC1 MCRIP1 TEPSIN FASN FAAP100 ZNF750 C17orf62 RFNG SLC16A3 GCGR CD7 TSPAN10 TMEM105 MAFG-AS1 CCDC137 STRA13 TBCD PYCR1 DCXR FSCN2 LOC105371925 DUS1L MYADML2 LRRC45 MRPL12 NARF NOTUM LOC105376791 FN3K ARL16 RAC3 SLC38A10 |
nsv470620 | Chr.17:81516973 - 82064485 on Build GRCh38 | Loss | SLC25A10 MCRIP1 HGS PCYT2 FAAP100 PDE6G RFNG GPS1 GCGR MAFG P4HB NPLOC4 TSPAN10 PPP1R27 ANAPC11 MAFG-AS1 NPB SIRT7 CCDC137 STRA13 OXLD1 ALYREF PYCR1 DCXR FSCN2 ARHGDIA ASPSCR1 DUS1L MYADML2 LRRC45 MRPL12 NOTUM MIR6786 ARL16 RAC3 |
nsv952390 | Chr.17:81637175 - 81860124 on Build GRCh38 | Deletion | SLC25A10 MCRIP1 HGS PDE6G GCGR MRPL12 P4HB TSPAN10 PPP1R27 CCDC137 OXLD1 MIR6786 ARL16 |
More Information
Additional Information:
For this assay, SNP(s) [rs118146126] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |