Assay Details
Target Gene Details
Entrez Gene ID: | 54910 |
Gene Name: | semaphorin 4C |
Gene Aliases: |
M-SEMA-F, SEMACL1, SEMAF, SEMAI |
Location: |
Chr.2:96859736-96870943 on Build GRCh38 |
Assay Gene Location: | Within Exon 18 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SEMA4C | NM_017789.4 | 15 | 2332 | NP_060259.4 |
XM_011511378.2 | 15 | 2440 | XP_011509680.1 | |
XM_011511379.2 | 15 | 2437 | XP_011509681.1 | |
XM_011511380.1 | 15 | 2775 | XP_011509682.1 | |
XM_011511381.1 | 15 | 2409 | XP_011509683.1 | |
XM_011511382.2 | 15 | 2368 | XP_011509684.1 | |
XM_011511383.1 | 15 | 2380 | XP_011509685.1 | |
XM_017004393.1 | 14 | 2862 | XP_016859882.1 | |
XM_017004394.1 | 13 | 1984 | XP_016859883.1 | |
AB051526.1 | 13 | 2562 | BAB21830.1 | |
AF258577.1 | 5 | 889 | AAG23780.1 | |
AF370374.1 | 2 | 1406 | AAQ15210.1 | |
AK000376.1 | 7 | 1272 | BAA91124.1 | |
AK075388.1 | 3 | 980 | BAC11588.1 | |
AK126512.1 | 3 | 2161 | ||
AY358842.1 | 15 | 2305 | AAQ89201.1 | |
BC017476.1 | 9 | 1608 | AAH17476.2 | |
BC062984.1 | 7 | 1304 | AAH62984.1 | |
BC109103.1 | 15 | 2261 | AAI09104.1 | |
BC109104.1 | 15 | 2258 | AAI09105.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv526313 | Chr.2:96667755 - 96994882 on Build GRCh38 | Loss | MIR3127 FAM178B LOC101927053 ANKRD23 LMAN2L CNNM4 ANKRD39 FER1L5 SEMA4C CNNM3 |
dgv607e201 | Chr.2:95855884 - 97561622 on Build GRCh38 | Deletion | DUSP2 LOC100506123 GPAT2 CIAO1 ITPRIPL1 FAHD2B KANSL3 SNRNP200 FAHD2CP LMAN2L ANKRD36 FER1L5 SEMA4C CNNM3 MIR3127 FAM178B LOC101927053 ADRA2B LOC107984110 LOC105373495 ASTL CNNM4 LOC653924 ANKRD36C STARD7 ARID5A ANKRD36B STARD7-AS1 LOC105373496 ANKRD39 NCAPH TMEM127 ANKRD23 NEURL3 LOC100506076 |
nsv1135873 | Chr.2:95981454 - 97579645 on Build GRCh38 | Deletion | DUSP2 LOC100506123 GPAT2 CIAO1 ITPRIPL1 FAHD2B KANSL3 SNRNP200 FAHD2CP LMAN2L ANKRD36 FER1L5 SEMA4C CNNM3 MIR3127 FAM178B LOC101927053 ADRA2B LOC107984110 LOC105373495 ASTL CNNM4 LOC653924 ANKRD36C STARD7 ARID5A ANKRD36B STARD7-AS1 LOC105373496 ANKRD39 NCAPH TMEM127 ANKRD23 NEURL3 LOC100506076 |
esv3425717 | Chr.2:95859900 - 97515905 on Build GRCh38 | Duplication | DUSP2 LOC100506123 GPAT2 CIAO1 ITPRIPL1 FAHD2B KANSL3 SNRNP200 FAHD2CP LMAN2L ANKRD36 FER1L5 SEMA4C CNNM3 MIR3127 FAM178B LOC101927053 ADRA2B LOC107984110 LOC105373495 ASTL CNNM4 LOC653924 ANKRD36C STARD7 ARID5A ANKRD36B STARD7-AS1 LOC105373496 ANKRD39 NCAPH TMEM127 ANKRD23 NEURL3 LOC100506076 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |