Assay Details
Target Gene Details
Entrez Gene ID: | 100126793 |
Gene Name: | ghrelin opposite strand/antisense RNA |
Gene Aliases: |
GHRL-AS1, GHRLAS, NCRNA00068 |
Location: |
Chr.3:10280952-10293449 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GHRLOS | NR_004431.3 | |||
NR_024144.2 | ||||
NR_024145.2 | ||||
NR_073566.1 | ||||
NR_073567.1 | ||||
NR_073568.1 | ||||
EU789528.1 | ||||
EU789529.1 | ||||
EU789530.1 | ||||
EU789534.1 | ||||
EU789535.1 | ||||
EU789536.1 | ||||
EU789537.1 | ||||
EU789538.1 | ||||
EU789539.1 | ||||
EU789540.1 | ||||
EU789541.1 | ||||
EU789542.1 | ||||
EU789543.1 | ||||
EU789544.1 | ||||
EU789545.1 | ||||
EU789546.1 | ||||
EU789547.1 | ||||
EU789548.1 | 1 | 1545 | ||
EU789549.1 | ||||
EU789550.1 | ||||
EU789551.1 | ||||
EU789552.1 |
Target Gene Details
Entrez Gene ID: | 9797 |
Gene Name: | TatD DNase domain containing 2 |
Gene Aliases: |
- |
Location: |
Chr.3:10248493-10281222 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TATDN2 | NM_014760.3 | 8 | 4631 | NP_055575.3 |
AW274827.1 | ||||
BC090935.1 | 8 | 4212 | AAH90935.1 | |
D86972.1 | 9 | 4419 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv436362 | Chr.3:10048344 - 11860564 on Build GRCh38 | Deletion | LINC00606 LINC00852 SLC6A11 FANCD2OS GHRL HRH1 ATP2B2-IT2 SLC6A1-AS1 LOC101927467 GHRLOS SEC13 MIR378B BRK1 VGLL4 MIR885 TAMM41 SLC6A1 FANCD2 ATP2B2 TATDN2 VHL ATG7 IRAK2 |
nsv508903 | Chr.3:10275353 - 10401894 on Build GRCh38 | Insertion | MIR378B MIR885 LINC00852 GHRL ATP2B2 TATDN2 GHRLOS SEC13 |
nsv589650 | Chr.3:10260488 - 10294102 on Build GRCh38 | Loss | LINC00852 GHRL TATDN2 GHRLOS |
dgv762e201 | Chr.3:10008967 - 11913136 on Build GRCh38 | Deletion | LINC00852 SLC6A11 GHRL ATP2B2-IT2 SLC6A1-AS1 LOC401052 LOC101927467 SEC13 MIR378B VGLL4 MIR885 TAMM41 CIDECP SLC6A1 TATDN2 VHL ATG7 LINC00606 FANCD2OS HRH1 FANCD2P2 GHRLOS EMC3 BRK1 FANCD2 ATP2B2 IRAK2 |
nsv1121603 | Chr.3:10071433 - 11889279 on Build GRCh38 | Deletion | LINC00606 LINC00852 SLC6A11 FANCD2OS GHRL HRH1 ATP2B2-IT2 FANCD2P2 SLC6A1-AS1 LOC101927467 GHRLOS SEC13 MIR378B BRK1 VGLL4 MIR885 TAMM41 SLC6A1 FANCD2 ATP2B2 TATDN2 VHL ATG7 IRAK2 |
nsv436869 | Chr.3:10064456 - 11877985 on Build GRCh38 | Insertion | LINC00606 LINC00852 SLC6A11 FANCD2OS GHRL HRH1 ATP2B2-IT2 FANCD2P2 SLC6A1-AS1 LOC101927467 GHRLOS SEC13 MIR378B BRK1 VGLL4 MIR885 TAMM41 SLC6A1 FANCD2 ATP2B2 TATDN2 VHL ATG7 IRAK2 |
nsv1073204 | Chr.3:9996548 - 11875005 on Build GRCh38 | Deletion | LINC00852 SLC6A11 GHRL ATP2B2-IT2 SLC6A1-AS1 LOC401052 LOC101927467 SEC13 MIR378B VGLL4 MIR885 TAMM41 CIDECP EMC3-AS1 SLC6A1 TATDN2 VHL ATG7 LINC00606 FANCD2OS HRH1 FANCD2P2 GHRLOS EMC3 BRK1 FANCD2 ATP2B2 IRAK2 |
More Information
Set Membership: |
Intragenic Exonic Non-exonic DGV Variation |