Hs02220512_cn

• Gene Symbol: BOC
• Assay Reference Genome Location: Chr.3:113212542 on build GRCh38
• Cytoband: 3q13.2

Target Gene Details

• Entrez Gene ID: 91653
• Gene Name: BOC cell adhesion associated, oncogene regulated
• Gene Aliases: CDON2
• Location: Chr.3:113211003-113287463 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
BOC	NM_001301861.1	1	46	NP_001288790.1
	NM_001301867.1			NP_001288796.1
	NM_033254.3			NP_150279.1
	XM_005247891.2			XP_005247948.1
	XM_005247892.2			XP_005247949.1
	XM_005247897.2			XP_005247954.1
	XM_011513305.2			XP_011511607.1
	XM_017007441.1			XP_016862930.1
	XM_017007442.1			XP_016862931.1
	XM_017007443.1			XP_016862932.1
	XM_017007444.1			XP_016862933.1
	XM_017007445.1	1	46	XP_016862934.1
	XM_017007446.1			XP_016862935.1
	XM_017007447.1			XP_016862936.1
	XM_017007448.1			XP_016862937.1
	XM_017007449.1			XP_016862938.1
	XM_017007450.1			XP_016862939.1
	XM_017007451.1			XP_016862940.1
	XM_017007452.1			XP_016862941.1
	XM_017007453.1			XP_016862942.1
	XM_017007454.1			XP_016862943.1
	XM_017007455.1			XP_016862944.1
	AK056359.1			BAB71163.1
	AK309055.1
	AY358328.1			AAQ88694.1
	DA247804.1	1	46

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1013506	Chr.3:113171761 - 113962104 on Build GRCh38	Gain	CFAP44-AS1 USF3 GRAMD1C BOC ZDHHC23 CFAP44 NAA50 ATP6V1A MIR4446 SIDT1 MIR8076 SPICE1
nsv829677	Chr.3:113138228 - 113320140 on Build GRCh38	Gain	BOC CFAP44 LOC101929717
nsv591293	Chr.3:112266260 - 113293950 on Build GRCh38	Loss	LINC01279 BTLA CCDC80 BOC CFAP44 LOC100129297 GTPBP8 SLC35A5 CD200 CD200R1L SLC9C1 LOC101929694 NEPRO LOC107986113 LOC105374042 LOC101929717 ATG3 CD200R1

More Information

Additional Information:

For this assay, SNP(s) [rs149279143] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

cell adhesion
smoothened signaling pathway
axon guidance
positive regulation of myoblast differentiation
positive regulation of muscle cell differentiation
mitophagy in response to mitochondrial depolarization

Function(s)

protein binding