Genomic Map
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Target Gene Details
Entrez Gene ID: | 266743 |
Gene Name: | neuronal PAS domain protein 4 |
Gene Aliases: |
Le-PAS, NXF, PASD10, bHLHe79 |
Location: |
Chr.11:66409158-66426707 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| NPAS4 | NM_001318804.1 | 6 | 2354 | NP_001305733.1 |
| NM_178864.3 | 7 | 2464 | NP_849195.2 | |
| XM_017017537.1 | 9 | 3903 | XP_016873026.1 | |
| XM_017017538.1 | 3 | 1616 | XP_016873027.1 | |
| AB049469.1 | 7 | 2389 | BAC19830.1 | |
| AK094025.1 | 4 | 1769 | BAC04271.1 | |
| AK096253.1 | 7 | 2464 | BAC04738.1 | |
| BC105001.1 | 7 | 2377 | AAI05002.1 | |
| BC105003.1 | 7 | 2377 | AAI05004.1 | |
| BC143630.1 | 6 | 2267 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv832193 | Chr.11:66352868 - 66511334 on Build GRCh38 | Loss |
 BBS1
LOC102724064
MRPL11
LOC101928069
NPAS4
DPP3
PELI3
SLC29A2
|
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Additional Information:
For this assay, SNP(s) [rs77039322] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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