Assay Details
Target Gene Details
Entrez Gene ID: | 2050 |
Gene Name: | EPH receptor B4 |
Gene Aliases: |
HTK, MYK1, TYRO11 |
Location: |
Chr.7:100802565-100827521 on Build GRCh38 |
Assay Gene Location: | Within Exon 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
EPHB4 | NM_004444.4 | 17 | 4070 | NP_004435.3 |
XM_017011816.1 | 17 | 3727 | XP_016867305.1 | |
AB209644.1 | 16 | 4780 | BAD92881.1 | |
AY056048.1 | 16 | 3508 | AAL14195.1 | |
BC052804.1 | 17 | 3747 | AAH52804.1 | |
U07695.1 | 17 | 3664 | AAA20598.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759547 | Chr.7:100757867 - 101105965 on Build GRCh38 | Gain+Loss | EPHB4 SRRT UFSP1 LOC102724094 MUC17 ZAN TRIP6 SLC12A9 ACHE MUC3A MIR6875 TRIM56 MUC12 |
nsv470381 | Chr.7:100642568 - 100834358 on Build GRCh38 | Loss | ACTL6B ZAN EPHB4 LOC105375429 GIGYF1 POP7 GNB2 TFR2 EPO |
esv2734888 | Chr.7:99975623 - 101290285 on Build GRCh38 | Deletion | ZNHIT1 MIR106B LOC105375429 ZKSCAN1 PCOLCE-AS1 MCM7 UFSP1 MIR4653 LOC102724094 PCOLCE LRCH4 MIR4658 AGFG2 NAT16 STAG3 TAF6 GATS SERPINE1 PVRIG C7orf61 AP1S1 GAL3ST4 ZCWPW1 MIR6875 SPDYE3 MIR6840 SAP25 MUC12 AP4M1 ZNF3 NYAP1 EPO ZAN TRIP6 ACHE PILRA GNB2 PLOD3 TRIM56 PMS2P1 ACTL6B SRRT MIR25 MEPCE PPP1R35 TFR2 MOSPD3 CNPY4 TSC22D4 GIGYF1 FBXO24 STAG3L5P-PVRIG2P-PILRB MIR93 MOGAT3 MUC3A AZGP1P1 GPC2 C7orf43 EPHB4 AZGP1 ZASP POP7 CLDN15 MUC17 ZSCAN21 VGF MBLAC1 COPS6 LAMTOR4 PILRB SLC12A9 PVRIG2P STAG3L5P FIS1 |
nsv607965 | Chr.7:100776465 - 100899511 on Build GRCh38 | Loss | ZAN TRIP6 EPHB4 SRRT SLC12A9 UFSP1 ACHE MIR6875 |
nsv1020837 | Chr.7:100715499 - 100911015 on Build GRCh38 | Loss | ZAN TRIP6 EPHB4 SRRT SLC12A9 UFSP1 ACHE MIR6875 EPO |
nsv951388 | Chr.7:100741378 - 100838178 on Build GRCh38 | Deletion | ZAN EPHB4 |
More Information
Additional Information:
For this assay, SNP(s) [rs76600840] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |