Assay Details
Target Gene Details
Entrez Gene ID: | 79183 |
Gene Name: | alpha tocopherol transfer protein like |
Gene Aliases: |
C20orf121 |
Location: |
Chr.20:44475886-44494603 on Build GRCh38 |
Assay Gene Location: | Within Exon 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TTPAL | NM_001039199.2 | 5 | 1381 | NP_001034288.1 |
NM_001261839.1 | 5 | 1279 | NP_001248768.1 | |
NM_024331.4 | 6 | 1405 | NP_077307.2 | |
XM_011529043.2 | 6 | 1517 | XP_011527345.1 | |
XM_011529044.2 | 6 | 2132 | XP_011527346.1 | |
XM_011529045.2 | 4 | 1270 | XP_011527347.1 | |
XM_017028063.1 | 6 | 1294 | XP_016883552.1 | |
AK125126.1 | 2 | 1411 | ||
BC003071.2 | 6 | 1384 | ||
CR936621.1 | 5 | 1335 | CAI56764.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1061719 | Chr.20:44415722 - 44602319 on Build GRCh38 | Gain | LINC01620 PKIG HNF4A SERINC3 TTPAL LINC01430 |
nsv586065 | Chr.20:44261867 - 44505244 on Build GRCh38 | Gain | GDAP1L1 R3HDML LINC01620 HNF4A SERINC3 HNF4A-AS1 FITM2 TTPAL LINC01430 MIR3646 |
More Information
Additional Information:
For this assay, SNP(s) [rs73611707] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |