Hs02187609_cn

• Gene Symbol: DCAF1
• Assay Reference Genome Location: Chr.3:51412460 on build GRCh38
• Cytoband: 3p21.2

Target Gene Details

• Entrez Gene ID: 9730
• Gene Name: DDB1 and CUL4 associated factor 1
• Gene Aliases: VPRBP
• Location: Chr.3:51395867-51505620 on Build GRCh38
• Assay Gene Location: Overlaps Intron 24 - Exon 25

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
DCAF1	NM_001171904.1			NP_001165375.1
	NM_014703.2			NP_055518.1
	XM_005276753.4			XP_005276810.1
	XM_005276755.4			XP_005276812.1
	XM_011534273.2			XP_011532575.1
	XM_011534274.2			XP_011532576.1
	XM_011534275.2			XP_011532577.1
	XM_011534276.2			XP_011532578.1
	XM_011534277.2			XP_011532579.1
	XM_017007546.1			XP_016863035.1
	XM_017007547.1			XP_016863036.1
	XM_017007548.1			XP_016863037.1
	XM_017007549.1			XP_016863038.1
	XM_017007550.1			XP_016863039.1
	XM_017007551.1			XP_016863040.1
	AB018343.1
	AF061935.1			AAG27134.1
	AK023239.1
	AL080145.1			CAB45738.1
	BC022792.1			AAH22792.1
	BC110371.1			AAI10372.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv590277	Chr.3:51370620 - 51466575 on Build GRCh38	Loss	DOCK3 MANF RBM15B DCAF1
nsv3816	Chr.3:51402359 - 51443460 on Build GRCh38	Insertion	DCAF1
nsv590276	Chr.3:51358140 - 51431657 on Build GRCh38	Loss	DOCK3 MANF RBM15B DCAF1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
viral process
protein ubiquitination
B cell differentiation
V(D)J recombination
cell competition in a multicellular organism
histone H2A-T120 phosphorylation

Function(s)

protein binding
ATP binding
histone kinase activity (H2A-T120 specific)