Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 6 - Exon 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | NP_848632.2 | ||
XM_017017654.1 | XP_016873143.1 | |||
AB089939.1 | BAD06471.1 | |||
BC131528.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | RASSF7 MIR210HG IFITM3 LOC143666 RNH1 PGGHG LRRC56 MIR210 SIGIRR IFITM1 IFITM5 LMNTD2 HRAS IRF7 LOC101059906 B4GALNT4 ANO9 PTDSS2 CDHR5 IFITM2 PHRF1 PKP3 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | B4GALNT4 ANO9 SIGIRR PKP3 |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | B4GALNT4 PKP3 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | B4GALNT4 ANO9 PTDSS2 RNH1 SIGIRR PKP3 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | B4GALNT4 ANO9 SIGIRR PKP3 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | IFITM3 PGGHG SIGIRR IFITM1 MIR6743 SIRT3 IFITM5 RIC8A B4GALNT4 ANO9 PTDSS2 BET1L ODF3 IFITM2 PKP3 PSMD13 NLRP6 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | B4GALNT4 ANO9 PTDSS2 SIGIRR PKP3 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | SNORA52 MIR210HG POLR2L LOC143666 RNH1 DEAF1 PDDC1 TMEM80 CD151 LOC101059906 B4GALNT4 RPLP2 PANO1 PTDSS2 CDHR5 DRD4 AP2A2 LOC171391 RASSF7 EPS8L2 LRRC56 MIR210 TALDO1 SIGIRR PIDD1 SCT LMNTD2 HRAS SLC25A22 IRF7 ANO9 TSPAN4 CRACR2B PNPLA2 PHRF1 CHID1 PKP3 CEND1 |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |