Assay Details
Target Gene Details
Entrez Gene ID: | 84894 |
Gene Name: | leucine rich repeat and Ig domain containing 1 |
Gene Aliases: |
LERN1, LRRN6A, UNQ201 |
Location: |
Chr.15:77613024-77820900 on Build GRCh38 |
Assay Gene Location: | Within Exon 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LINGO1 | NM_001301186.1 | 6 | 1019 | NP_001288115.1 |
NM_001301187.1 | 6 | 1036 | NP_001288116.1 | |
NM_001301189.1 | 6 | 1030 | NP_001288118.1 | |
NM_001301191.1 | 6 | 1215 | NP_001288120.1 | |
NM_001301192.1 | 5 | 1153 | NP_001288121.1 | |
NM_001301194.1 | 4 | 971 | NP_001288123.1 | |
NM_001301195.1 | 4 | 906 | NP_001288124.1 | |
NM_001301197.1 | 4 | 919 | NP_001288126.1 | |
NM_001301198.1 | 3 | 716 | NP_001288127.1 | |
NM_001301199.1 | 4 | 889 | NP_001288128.1 | |
NM_001301200.1 | 4 | 962 | NP_001288129.1 | |
NM_032808.6 | 2 | 734 | NP_116197.4 | |
XM_011522118.2 | 2 | 646 | XP_011520420.1 | |
XM_017022682.1 | 7 | 1362 | XP_016878171.1 | |
AK291363.1 | 2 | 700 | ||
AL834260.1 | 1 | 394 | CAD38935.1 | |
AY324320.1 | 2 | 574 | AAQ97216.1 | |
AY324322.1 | 1 | 70 | AAQ97217.1 | |
AY324323.1 | 1 | 198 | AAQ97218.1 | |
AY358284.1 | 2 | 554 | AAQ88651.1 | |
BC011057.1 | 2 | 574 | AAH11057.2 | |
BC068558.1 | 4 | 947 | AAH68558.1 | |
BI523562.1 | 2 | 765 | ||
BI825536.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833060 | Chr.15:77524312 - 77742862 on Build GRCh38 | Gain | LINGO1-AS1 LINGO1-AS2 LOC101929457 LINGO1 |
nsv1036749 | Chr.15:77591684 - 77620066 on Build GRCh38 | Gain | LINGO1 |
esv2749898 | Chr.15:75764003 - 77933523 on Build GRCh38 | Deletion | TMEM266 LINGO1-AS2 LOC101929457 TSPAN3 MIR3713 LINGO1 PSTPIP1 FBXO22 PEAK1 SCAPER LOC645752 LINGO1-AS1 LOC101929439 RCN2 LOC441728 ISL2 HMG20A FBXO22-AS1 NRG4 TYRO3P LINC00597 UBE2Q2 ETFA |
nsv1040852 | Chr.15:76867896 - 77845199 on Build GRCh38 | Gain | SCAPER LINGO1-AS1 LINGO1-AS2 RCN2 LOC101929457 HMG20A TSPAN3 LINC00597 LINGO1 PSTPIP1 PEAK1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |