Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Within Exon 15 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | 14 | 1864 | NP_848632.2 |
XM_017017654.1 | 14 | 3176 | XP_016873143.1 | |
AB089939.1 | 14 | 1855 | BAD06471.1 | |
BC131528.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | IFITM3 IFITM1 LMNTD2 CDHR5 LOC143666 HRAS RNH1 PTDSS2 RASSF7 MIR210 LRRC56 PKP3 IRF7 ANO9 MIR210HG SIGIRR LOC101059906 PGGHG IFITM5 PHRF1 B4GALNT4 IFITM2 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | SIGIRR PKP3 B4GALNT4 ANO9 |
nsv1118197 | Chr.11:374500 - 377100 on Build GRCh38 | Deletion | B4GALNT4 |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | PKP3 B4GALNT4 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | SIGIRR RNH1 PTDSS2 PKP3 B4GALNT4 ANO9 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | SIGIRR PKP3 B4GALNT4 ANO9 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | IFITM3 IFITM1 NLRP6 PTDSS2 BET1L PKP3 ANO9 PSMD13 MIR6743 SIGIRR RIC8A ODF3 PGGHG IFITM5 SIRT3 B4GALNT4 IFITM2 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | SIGIRR PTDSS2 PKP3 B4GALNT4 ANO9 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | CD151 PDDC1 PIDD1 LMNTD2 LOC143666 TALDO1 RNH1 SCT TSPAN4 MIR210 POLR2L PKP3 SNORA52 SLC25A22 IRF7 CRACR2B SIGIRR DRD4 LOC101059906 PHRF1 EPS8L2 LOC171391 PNPLA2 PANO1 CDHR5 TMEM80 HRAS CHID1 PTDSS2 DEAF1 RASSF7 LRRC56 AP2A2 ANO9 MIR210HG CEND1 RPLP2 B4GALNT4 |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |