Assay Details
Target Gene Details
Entrez Gene ID: | 3299 |
Gene Name: | heat shock transcription factor 4 |
Gene Aliases: |
CTM, CTRCT5 |
Location: |
Chr.16:67163385-67169945 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 9 - Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HSF4 | NM_001040667.2 | NP_001035757.1 | ||
NM_001538.3 | NP_001529.2 | |||
AB029348.1 | BAA84582.1 | |||
AK225152.1 | ||||
AK296210.1 | ||||
D87673.1 | BAA13433.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv522852 | Chr.16:67153308 - 68071571 on Build GRCh38 | Gain | LOC100505942 AGRP NRN1L NUTF2 ENKD1 CARMIL2 PLEKHG4 LCAT CTCF SLC12A4 DPEP3 PSKH1 HSF4 ELMO3 E2F4 ATP6V0D1 TPPP3 FAM65A GFOD2 C16orf86 EDC4 MIR328 KCTD19 LOC107984813 HSD11B2 FHOD1 SLC9A5 TSNAXIP1 NOL3 LRRC36 THAP11 LOC100131303 CENPT PARD6A TMEM208 ZDHHC1 CTRL ACD EXOC3L1 DUS2 FBXL8 PSMB10 LOC105369155 LRRC29 TRADD DPEP2 KIAA0895L DDX28 RANBP10 |
nsv827707 | Chr.16:67148355 - 67289296 on Build GRCh38 | Loss | ELMO3 E2F4 SLC9A5 C16orf70 EXOC3L1 NOL3 B3GNT9 FBXL8 LOC105369155 LRRC29 TRADD MIR328 PLEKHG4 TMEM208 HSF4 KIAA0895L FHOD1 |
nsv952044 | Chr.16:67141198 - 67244397 on Build GRCh38 | Deletion | ELMO3 E2F4 C16orf70 EXOC3L1 NOL3 B3GNT9 FBXL8 LOC105369155 LRRC29 TRADD MIR328 TMEM208 HSF4 KIAA0895L FHOD1 |
nsv1160429 | Chr.16:67161549 - 67220197 on Build GRCh38 | Deletion | LOC105369155 ELMO3 LRRC29 E2F4 MIR328 EXOC3L1 NOL3 HSF4 KIAA0895L FBXL8 |
nsv524363 | Chr.16:67136529 - 68071571 on Build GRCh38 | Loss | LOC100505942 AGRP NRN1L NUTF2 ENKD1 CARMIL2 PLEKHG4 LCAT CTCF SLC12A4 DPEP3 PSKH1 HSF4 ELMO3 E2F4 ATP6V0D1 TPPP3 FAM65A GFOD2 C16orf86 EDC4 MIR328 KCTD19 LOC107984813 HSD11B2 FHOD1 SLC9A5 TSNAXIP1 NOL3 LRRC36 B3GNT9 THAP11 LOC100131303 CENPT PARD6A TMEM208 ZDHHC1 CTRL ACD C16orf70 EXOC3L1 DUS2 FBXL8 PSMB10 LOC105369155 LRRC29 TRADD DPEP2 KIAA0895L DDX28 RANBP10 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |