Assay Details
Target Gene Details
Entrez Gene ID: | 5097 |
Gene Name: | protocadherin 1 |
Gene Aliases: |
PC42, PCDH42 |
Location: |
Chr.5:141852319-141878410 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDH1 | NM_001278613.1 | 3 | 2082 | NP_001265542.1 |
NM_001278615.1 | 2 | 1239 | NP_001265544.1 | |
NM_002587.4 | 3 | 2159 | NP_002578.2 | |
NM_032420.3 | 3 | 2159 | NP_115796.2 | |
XM_005268452.2 | 3 | 4489 | XP_005268509.1 | |
XM_005268454.4 | 3 | 4489 | XP_005268511.1 | |
XM_005268455.2 | 2 | 1182 | XP_005268512.1 | |
XM_017009517.1 | 2 | 2116 | XP_016865006.1 | |
XM_017009518.1 | 2 | 1182 | XP_016865007.1 | |
AK075233.1 | 2 | 1528 | ||
AK289512.1 | 3 | 2159 | ||
AK300564.1 | 2 | 1182 | ||
AK304231.1 | 3 | 2044 | ||
AK308338.1 | 2 | 1239 | ||
BC035812.1 | 3 | 2128 | AAH35812.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1154058 | Chr.5:141632251 - 142199943 on Build GRCh38 | Deletion |
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nsv509093 | Chr.5:141806786 - 141884647 on Build GRCh38 | Insertion |
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esv3369680 | Chr.5:141863903 - 141865401 on Build GRCh38 | Duplication |
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dgv1654e212 | Chr.5:141854041 - 141866770 on Build GRCh38 | Loss |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)