Assay Details
Target Gene Details
Entrez Gene ID: | 54910 |
Gene Name: | semaphorin 4C |
Gene Aliases: |
M-SEMA-F, SEMACL1, SEMAF, SEMAI |
Location: |
Chr.2:96859736-96870943 on Build GRCh38 |
Assay Gene Location: | Within Exon 18 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SEMA4C | NM_017789.4 | 15 | 2469 | NP_060259.4 |
XM_011511378.2 | 15 | 2577 | XP_011509680.1 | |
XM_011511379.2 | 15 | 2574 | XP_011509681.1 | |
XM_011511380.1 | 15 | 2912 | XP_011509682.1 | |
XM_011511381.1 | 15 | 2546 | XP_011509683.1 | |
XM_011511382.2 | 15 | 2505 | XP_011509684.1 | |
XM_011511383.1 | 15 | 2517 | XP_011509685.1 | |
XM_017004393.1 | 14 | 2999 | XP_016859882.1 | |
XM_017004394.1 | 13 | 2121 | XP_016859883.1 | |
AB051526.1 | 13 | 2699 | BAB21830.1 | |
AF258577.1 | 5 | 1026 | AAG23780.1 | |
AF370374.1 | 2 | 1543 | AAQ15210.1 | |
AK000376.1 | 7 | 1409 | BAA91124.1 | |
AK075388.1 | 3 | 1117 | BAC11588.1 | |
AK126512.1 | 3 | 2298 | ||
AY358842.1 | 15 | 2442 | AAQ89201.1 | |
BC017476.1 | 9 | 1745 | AAH17476.2 | |
BC062984.1 | 7 | 1441 | AAH62984.1 | |
BC109103.1 | 15 | 2398 | AAI09104.1 | |
BC109104.1 | 15 | 2395 | AAI09105.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv526313 | Chr.2:96667755 - 96994882 on Build GRCh38 | Loss | CNNM3 FER1L5 SEMA4C LOC101927053 ANKRD39 FAM178B LMAN2L MIR3127 ANKRD23 CNNM4 |
dgv607e201 | Chr.2:95855884 - 97561622 on Build GRCh38 | Deletion | ANKRD36 FAHD2B ASTL SEMA4C NCAPH STARD7-AS1 LOC105373496 KANSL3 CNNM3 LOC107984110 FER1L5 LOC100506076 FAM178B ITPRIPL1 MIR3127 NEURL3 FAHD2CP CIAO1 LOC101927053 ANKRD36C LOC653924 ADRA2B DUSP2 ANKRD36B TMEM127 ANKRD39 STARD7 GPAT2 LMAN2L LOC105373495 ANKRD23 LOC100506123 ARID5A CNNM4 SNRNP200 |
nsv1135873 | Chr.2:95981454 - 97579645 on Build GRCh38 | Deletion | ANKRD36 FAHD2B ASTL SEMA4C NCAPH STARD7-AS1 LOC105373496 KANSL3 CNNM3 LOC107984110 FER1L5 LOC100506076 FAM178B ITPRIPL1 MIR3127 NEURL3 FAHD2CP CIAO1 LOC101927053 ANKRD36C LOC653924 ADRA2B DUSP2 ANKRD36B TMEM127 ANKRD39 STARD7 GPAT2 LMAN2L LOC105373495 ANKRD23 LOC100506123 ARID5A CNNM4 SNRNP200 |
esv3425717 | Chr.2:95859900 - 97515905 on Build GRCh38 | Duplication | ANKRD36 FAHD2B ASTL SEMA4C NCAPH STARD7-AS1 LOC105373496 KANSL3 CNNM3 LOC107984110 FER1L5 LOC100506076 FAM178B ITPRIPL1 MIR3127 NEURL3 FAHD2CP CIAO1 LOC101927053 ANKRD36C LOC653924 ADRA2B DUSP2 ANKRD36B TMEM127 ANKRD39 STARD7 GPAT2 LMAN2L LOC105373495 ANKRD23 LOC100506123 ARID5A CNNM4 SNRNP200 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |