Assay Details
Target Gene Details
Entrez Gene ID: | 84894 |
Gene Name: | leucine rich repeat and Ig domain containing 1 |
Gene Aliases: |
LERN1, LRRN6A, UNQ201 |
Location: |
Chr.15:77613024-77820900 on Build GRCh38 |
Assay Gene Location: | Within Exon 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LINGO1 | NM_001301186.1 | 6 | 2209 | NP_001288115.1 |
NM_001301187.1 | 6 | 2226 | NP_001288116.1 | |
NM_001301189.1 | 6 | 2220 | NP_001288118.1 | |
NM_001301191.1 | 6 | 2405 | NP_001288120.1 | |
NM_001301192.1 | 5 | 2343 | NP_001288121.1 | |
NM_001301194.1 | 4 | 2161 | NP_001288123.1 | |
NM_001301195.1 | 4 | 2096 | NP_001288124.1 | |
NM_001301197.1 | 4 | 2109 | NP_001288126.1 | |
NM_001301198.1 | 3 | 1906 | NP_001288127.1 | |
NM_001301199.1 | 4 | 2079 | NP_001288128.1 | |
NM_001301200.1 | 4 | 2152 | NP_001288129.1 | |
NM_032808.6 | 2 | 1924 | NP_116197.4 | |
XM_011522118.2 | 2 | 1836 | XP_011520420.1 | |
XM_017022682.1 | 7 | 2552 | XP_016878171.1 | |
AK027500.1 | 1 | 857 | BAB55157.1 | |
AK291363.1 | 2 | 1890 | ||
AL834260.1 | 1 | 1584 | CAD38935.1 | |
AY324320.1 | 2 | 1764 | AAQ97216.1 | |
AY324322.1 | 1 | 1260 | AAQ97217.1 | |
AY324323.1 | 1 | 1388 | AAQ97218.1 | |
AY358284.1 | 2 | 1744 | AAQ88651.1 | |
BC011057.1 | 2 | 1764 | AAH11057.2 | |
BC068558.1 | 4 | 2137 | AAH68558.1 | |
H11343.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833060 | Chr.15:77524312 - 77742862 on Build GRCh38 | Gain | LINGO1-AS2 LINGO1 LINGO1-AS1 LOC101929457 |
nsv1036749 | Chr.15:77591684 - 77620066 on Build GRCh38 | Gain | LINGO1 |
esv2749898 | Chr.15:75764003 - 77933523 on Build GRCh38 | Deletion | LINGO1 NRG4 SCAPER TYRO3P TMEM266 LINGO1-AS1 PSTPIP1 RCN2 LINC00597 LOC101929439 TSPAN3 LOC101929457 FBXO22 HMG20A LOC645752 LINGO1-AS2 LOC441728 MIR3713 ETFA PEAK1 ISL2 FBXO22-AS1 UBE2Q2 |
nsv1040852 | Chr.15:76867896 - 77845199 on Build GRCh38 | Gain | LINGO1-AS2 LINGO1 SCAPER LINGO1-AS1 PSTPIP1 RCN2 LINC00597 PEAK1 TSPAN3 LOC101929457 HMG20A |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |