Hs01889788_cn

• Gene Symbol: AKNA
• Assay Reference Genome Location: Chr.9:114337301 on build GRCh38
• Cytoband: 9q32

Target Gene Details

• Entrez Gene ID: 80709
• Gene Name: AT-hook transcription factor
• Gene Aliases: -
• Location: Chr.9:114334149-114398498 on Build GRCh38
• Assay Gene Location: Overlaps Intron 27 - Exon 28

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
AKNA	NM_001317950.1			NP_001304879.1
	NM_001317952.1			NP_001304881.1
	NM_030767.5			NP_110394.3
	XM_005252244.2			XP_005252301.1
	XM_005252245.1			XP_005252302.1
	XM_005252247.4			XP_005252304.1
	XM_005252248.2			XP_005252305.1
	XM_006717294.1			XP_006717357.1
	XM_011519063.2			XP_011517365.1
	XM_011519065.2			XP_011517367.2
	XM_017015172.1			XP_016870661.1
	AF286341.1			AAK83024.1
	AK024431.1			BAB15721.1
	AK074040.1			BAB84866.1
	AK131082.2			BAC85132.1
	AK160382.1			BAD18725.1
	AL713755.1
	AL833220.1
	AY703039.1			AAU34186.1
	AY703040.1			AAU34187.1
	AY703043.1			AAU34190.1
	AY703044.1			AAU34191.1
	AY703045.1			AAU34192.1
	AY703046.1			AAU34193.1
	BC042202.1
	BC055285.1			AAH55285.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv948n27	Chr.9:114193988 - 114693895 on Build GRCh38	Gain	LOC100505478 WHRN ATP6V1G1 ORM1 MIR455 COL27A1 ORM2 TMEM268 AKNA
esv2752277	Chr.9:114323991 - 114338965 on Build GRCh38	Gain	ORM1 ORM2 AKNA
esv2761285	Chr.9:114049617 - 114340988 on Build GRCh38	Gain	KIF12 AMBP ZNF618 ORM1 MIR455 COL27A1 ORM2 AKNA
nsv509319	Chr.9:114297186 - 114380605 on Build GRCh38	Insertion	ORM1 COL27A1 ORM2 AKNA
dgv7706n100	Chr.9:114182745 - 114697870 on Build GRCh38	Gain	LOC100505478 WHRN ATP6V1G1 ORM1 MIR455 COL27A1 ORM2 TMEM268 AKNA
dgv33e196	Chr.9:114030664 - 114604363 on Build GRCh38	Duplication	KIF12 AMBP WHRN ATP6V1G1 ZNF618 ORM1 MIR455 COL27A1 ORM2 TMEM268 AKNA
nsv471320	Chr.9:114284841 - 114346385 on Build GRCh38	Gain	ORM1 COL27A1 ORM2 AKNA
nsv615233	Chr.9:114167820 - 114486199 on Build GRCh38	Gain	WHRN ORM1 MIR455 COL27A1 ORM2 AKNA
dgv949n27	Chr.9:114283521 - 114343856 on Build GRCh38	Gain	ORM1 COL27A1 ORM2 AKNA

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

transcription from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding