Assay Details
Target Gene Details
Entrez Gene ID: | 55911 |
Gene Name: | apolipoprotein B receptor |
Gene Aliases: |
APOB100R, APOB48R |
Location: |
Chr.16:28494649-28498970 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 3 - Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
APOBR | NM_018690.3 | NP_061160.3 | ||
AF141332.1 | AAF76255.1 | |||
AF141334.1 | AAF78765.1 | |||
AK025123.1 | ||||
AK075085.1 | ||||
BC119786.1 | ||||
BC119788.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509608 | Chr.16:28449797 - 28632895 on Build GRCh38 | Insertion | CLN3 SGF29 APOBR SULT1A1 SULT1A2 IL27 NUPR1 |
esv2758640 | Chr.16:28163817 - 29139232 on Build GRCh38 | Gain+Loss | CD19 ATXN2L TUFM ATP2A1-AS1 NFATC2IP IL27 NUPR1 RRN3P2 SULT1A2 MIR4721 SBK1 SH2B1 NPIPB6 SGF29 SULT1A1 NPIPB9 XPO6 MIR4517 NPIPB8 EIF3CL SPNS1 MIR6862-1 EIF3C CLN3 LAT RABEP2 ATP2A1 APOBR MIR6862-2 LOC101928215 NPIP |
nsv1059555 | Chr.16:28373144 - 29195838 on Build GRCh38 | Gain | CD19 ATXN2L TUFM ATP2A1-AS1 NFATC2IP IL27 NUPR1 RRN3P2 SULT1A2 MIR4721 SH2B1 SGF29 SULT1A1 NPIPB9 MIR4517 NPIPB8 EIF3CL SPNS1 MIR6862-1 EIF3C CLN3 LAT LOC107984832 RABEP2 ATP2A1 APOBR MIR6862-2 LOC101928215 NPIP |
nsv833180 | Chr.16:28346157 - 28574165 on Build GRCh38 | Loss | CLN3 NPIPB6 SGF29 APOBR EIF3CL IL27 NUPR1 MIR6862-1 |
nsv9415 | Chr.16:28468881 - 28498959 on Build GRCh38 | Gain | CLN3 APOBR |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |