Assay Details
Target Gene Details
Entrez Gene ID: | 23254 |
Gene Name: | kazrin, periplakin interacting protein |
Gene Aliases: |
KAZ |
Location: |
Chr.1:13893387-15118048 on Build GRCh38 |
Assay Gene Location: | Within Exon 22 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
KAZN | NM_201628.2 | 15 | 4604 | NP_963922.2 |
XM_005245795.4 | 17 | 4859 | XP_005245852.1 | |
XM_011541074.2 | 16 | 6795 | XP_011539376.1 | |
XM_011541075.2 | 14 | 6451 | XP_011539377.1 | |
XM_011541076.2 | 14 | 6596 | XP_011539378.1 | |
XM_011541077.2 | 14 | 7575 | XP_011539379.1 | |
XM_011541081.2 | 8 | 5275 | XP_011539383.1 | |
AF052120.1 | 1 | 260 | ||
AK057155.1 | 1 | 1164 | ||
AK125388.1 | 1 | 1779 |
Target Gene Details
Entrez Gene ID: | 200197 |
Gene Name: | TMEM51 antisense RNA 1 |
Gene Aliases: |
C1orf126 |
Location: |
Chr.1:15111815-15152464 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TMEM51-AS1 | NR_027136.1 | 5 | 2164 | |
AK074283.1 | 6 | 2287 | BAB85035.1 | |
AK124431.1 | 5 | 2102 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833425 | Chr.1:15083330 - 15291728 on Build GRCh38 | Gain | FHAD1 KAZN TMEM51-AS1 TMEM51 C1orf195 |
nsv508913 | Chr.1:15092390 - 15165461 on Build GRCh38 | Insertion | KAZN TMEM51-AS1 TMEM51 C1orf195 |
nsv545591 | Chr.1:14880515 - 15130423 on Build GRCh38 | Loss | KAZN TMEM51-AS1 |
More Information
Additional Information:
For this assay, SNP(s) [rs116059569,rs72873843] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |