Assay Details
Target Gene Details
Entrez Gene ID: | 84435 |
Gene Name: | adhesion G protein-coupled receptor A1 |
Gene Aliases: |
GPR123 |
Location: |
Chr.10:133070929-133131675 on Build GRCh38 |
Assay Gene Location: | Within Exon 11 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ADGRA1 | NM_001083909.2 | NP_001077378.1 | ||
XM_005252695.1 | 10 | 1968 | XP_005252752.1 | |
XM_017016779.1 | XP_016872268.1 | |||
AK124728.1 | ||||
AY181241.1 | 10 | 1968 | AAO27353.1 | |
BG818167.1 | ||||
CB045391.1 | ||||
DA208698.1 | ||||
EF536972.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759793 | Chr.10:133030918 - 133619181 on Build GRCh38 | Gain+Loss | ADAM8 MTG1 SYCE1 SPRN PRAP1 KNDC1 FUOM MIR3944 VENTX MIR202HG SCART1 ZNF511 ADGRA1 UTF1 TUBGCP2 ADGRA1-AS1 MIR202 SPRNP1 ECHS1 CYP2E1 PAOX CALY |
dgv998n100 | Chr.10:132998894 - 133170978 on Build GRCh38 | Gain | ADGRA1 ADGRA1-AS1 KNDC1 |
esv3625022 | Chr.10:132998655 - 133120915 on Build GRCh38 | Gain | ADGRA1 ADGRA1-AS1 |
esv3625015 | Chr.10:132889012 - 133114687 on Build GRCh38 | Gain | CFAP46 LINC01167 ADGRA1 LINC01166 LINC01168 ADGRA1-AS1 |
nsv470979 | Chr.10:133033478 - 133118280 on Build GRCh38 | Loss | ADGRA1 ADGRA1-AS1 |
nsv552526 | Chr.10:132699017 - 133103793 on Build GRCh38 | Gain | CFAP46 LINC01167 NKX6-2 ADGRA1 LINC01166 LINC01168 INPP5A ADGRA1-AS1 |
nsv552540 | Chr.10:133085338 - 133102541 on Build GRCh38 | Loss | ADGRA1 ADGRA1-AS1 |
nsv552539 | Chr.10:133061918 - 133103793 on Build GRCh38 | Loss | ADGRA1 ADGRA1-AS1 |
nsv467498 | Chr.10:132900981 - 133134139 on Build GRCh38 | Gain | CFAP46 LINC01167 ADGRA1 LINC01166 LINC01168 ADGRA1-AS1 |
nsv1054934 | Chr.10:130334322 - 133158679 on Build GRCh38 | Gain | TCERG1L-AS1 C10orf91 PPP2R2D TCERG1L LINC01167 NKX6-2 STK32C JAKMIP3 LINC01168 MIR378C LINC01164 LRRC27 BNIP3 LOC107984282 CFAP46 ADGRA1 LINC01166 INPP5A ADGRA1-AS1 PWWP2B LOC105378568 DPYSL4 |
nsv528260 | Chr.10:132859348 - 133620799 on Build GRCh38 | Loss | ADAM8 MTG1 LINC01167 SYCE1 PRAP1 MIR3944 VENTX CFAP46 MIR202 ECHS1 SPRN LINC01168 KNDC1 FUOM MIR202HG SCART1 ZNF511 ADGRA1 UTF1 LINC01166 TUBGCP2 ADGRA1-AS1 SPRNP1 CYP2E1 PAOX CALY |
nsv832036 | Chr.10:133089509 - 133368232 on Build GRCh38 | Loss | ADAM8 PRAP1 KNDC1 FUOM VENTX MIR202HG ZNF511 ADGRA1 UTF1 TUBGCP2 MIR202 ECHS1 CALY |
nsv952703 | Chr.10:133037897 - 133143896 on Build GRCh38 | Deletion | ADGRA1 ADGRA1-AS1 |
More Information
Additional Information:
For this assay, SNP(s) [rs41283463] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |