Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Exon 14 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | 11 | 2134 | NP_001280563.1 |
NM_021008.3 | 12 | 2359 | NP_066288.2 | |
AB209831.1 | 10 | 1260 | BAD93068.1 | |
AF007165.1 | 12 | 1508 | AAB62704.1 | |
AF049459.1 | 12 | 1702 | AAC79676.1 | |
AF049460.1 | 13 | 1966 | AAC79677.1 | |
AF068892.1 | 12 | 1472 | AAC25714.1 | |
AF068893.1 | 12 | 1472 | AAC25715.1 | |
AF068894.1 | 12 | 1473 | AAC25716.1 | |
AF068895.1 | 12 | 1473 | AAC25717.1 | |
AF068896.1 | 12 | 1473 | AAC25718.1 | |
AF068897.1 | 12 | 1474 | AAC25719.1 | |
AK289873.1 | 12 | 1585 | ||
AK291383.1 | 12 | 2140 | ||
BC053322.1 | 12 | 1767 | AAH53322.1 | |
FJ985253.1 | 11 | 1570 | ||
HY324291.1 | 1 | 407 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv1522n54 | Chr.11:557342 - 656845 on Build GRCh38 | Loss | CDHR5 LMNTD2 MIR210 LOC143666 PHRF1 DEAF1 IRF7 MIR210HG SCT RASSF7 DRD4 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | CDHR5 CRACR2B LRRC56 ANO9 EPS8L2 MIR210HG PKP3 RNH1 DRD4 SLC25A22 PNPLA2 LMNTD2 TMEM80 LOC101059906 B4GALNT4 SIGIRR DEAF1 SCT RASSF7 CD151 MIR6744 MIR210 HRAS TSPAN4 MUC6 MUC5B MUC2 AP2A2 SNORA52 CHID1 TALDO1 LOC171391 PTDSS2 PDDC1 PANO1 TOLLIP RPLP2 LOC143666 PIDD1 PHRF1 CEND1 IRF7 MUC5AC POLR2L LOC101927503 |
nsv552861 | Chr.11:589246 - 662407 on Build GRCh38 | Loss | CDHR5 PHRF1 DEAF1 IRF7 SCT DRD4 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | TALDO1 TMEM80 DEAF1 EPS8L2 DRD4 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | CDHR5 CRACR2B LRRC56 ANO9 EPS8L2 MIR210HG RNH1 DRD4 SLC25A22 PNPLA2 LMNTD2 TMEM80 LOC101059906 SIGIRR DEAF1 SCT RASSF7 CD151 TOLLIP-AS1 MIR6744 MIR210 HRAS TSPAN4 MUC6 MUC5B MUC2 AP2A2 SNORA52 CHID1 TALDO1 LOC171391 PTDSS2 PDDC1 PANO1 TOLLIP RPLP2 LOC143666 PIDD1 PHRF1 CEND1 IRF7 MUC5AC POLR2L LOC101927503 |
esv2762889 | Chr.11:606294 - 653614 on Build GRCh38 | Loss | CDHR5 PHRF1 DEAF1 IRF7 SCT DRD4 |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | CDHR5 MIR210 LRRC56 HRAS MIR210HG DRD4 LMNTD2 LOC143666 PHRF1 DEAF1 IRF7 SCT RASSF7 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | CDHR5 MIR210 LRRC56 HRAS MIR210HG RNH1 DRD4 PTDSS2 LMNTD2 LOC101059906 LOC143666 PHRF1 DEAF1 IRF7 SCT RASSF7 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | CDHR5 CRACR2B LRRC56 ANO9 EPS8L2 MIR210HG PKP3 RNH1 DRD4 SLC25A22 PNPLA2 LMNTD2 TMEM80 LOC101059906 B4GALNT4 SIGIRR DEAF1 SCT RASSF7 CD151 MIR210 HRAS TSPAN4 AP2A2 SNORA52 CHID1 TALDO1 LOC171391 PTDSS2 PDDC1 PANO1 RPLP2 LOC143666 PIDD1 PHRF1 CEND1 IRF7 POLR2L |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | CDHR5 CRACR2B LRRC56 EPS8L2 MIR210HG RNH1 DRD4 SLC25A22 PNPLA2 LMNTD2 TMEM80 LOC101059906 DEAF1 SCT RASSF7 CD151 MIR210 HRAS TSPAN4 SNORA52 CHID1 TALDO1 LOC171391 PTDSS2 PDDC1 PANO1 RPLP2 LOC143666 PIDD1 PHRF1 CEND1 IRF7 POLR2L |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |