Assay Details
Target Gene Details
Entrez Gene ID: | 23645 |
Gene Name: | protein phosphatase 1 regulatory subunit 15A |
Gene Aliases: |
GADD34 |
Location: |
Chr.19:48872392-48876062 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PPP1R15A | NM_014330.3 | 2 | 1497 | NP_055145.3 |
AK001361.1 | 2 | 1468 | BAA91649.1 | |
AK225632.1 | 2 | 1468 | ||
AK296668.1 | 3 | 991 | ||
AK297615.1 | 3 | 1385 | ||
AK298765.1 | 2 | 782 | ||
AK311366.1 | 2 | 1022 | ||
BC003067.2 | 2 | 1450 | AAH03067.1 | |
CR457259.1 | 1 | 1228 | CAG33540.1 | |
U83981.1 | 2 | 1450 | AAC25631.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | CGB8 GRIN2D PPP1R15A LIN7B RPL18 CGB2 SPACA4 BSPH1 C19orf68 TEAD2 SNAR-G1 PTOV1 CD37 FTL PLA2G4C-AS1 SNAR-A3 CCDC155 LOC105372430 EMP3 NUCB1-AS1 PTOV1-AS1 CCDC114 CGB7 PRR12 TULP2 BAX ADM5 FAM83E LHB LOC105447645 SNAR-C2 TSKS DBP SNAR-A5 SIGLEC11 PNKP SNORD33 FLT3LG IZUMO1 SNORD35B MED25 PTH2 C19orf73 RASIP1 GYS1 SNAR-A12 RCN3 SNAR-C4 MIR150 ELSPBP1 CPT1C SNAR-A13 RPS11 NTF4 SPHK2 SNAR-C5 FUT1 SNAR-A8 MIR6800 PTOV1-AS2 MIR4749 SNAR-A4 PIH1D1 BCAT2 ATF5 MIR5088 SNAR-C3 NTN5 IL4I1 DHDH SNAR-A14 HSD17B14 SULT2B1 HRC FLJ26850 SNAR-A2 BCL2L12 CYTH2 SNAR-A10 SNAR-A1 RUVBL2 FUZ RRAS LOC101059948 MAMSTR SLC6A16 SNORD34 IRF3 CGB3 GRWD1 TMEM143 AKT1S1 PRMT1 SNAR-A11 MIR6798 SNAR-A9 KCNJ14 LOC100287477 AP2A1 SCAF1 SNAR-D VRK3 NUP62 CABP5 TRPM4 LOC101928295 SNAR-C1 SLC17A7 ALDH16A1 ZNF114 PLEKHA4 FGF21 RPL13A CARD8-AS1 FCGRT CA11 LMTK3 MIR4324 PLA2G4C SNAR-G2 NOSIP CGB1 MIR6799 SNAR-A6 SNRNP70 ZNF473 CARD8 SNAR-B2 SYNGR4 FUT2 GFY SEC1P NUCB1 KCNA7 SNORD35A KDELR1 TBC1D17 PPFIA3 LIG1 SNORD32A SNAR-B1 DKKL1 CGB5 MIR4750 SIGLEC16 MIR4751 PRRG2 SNAR-A7 |
nsv470148 | Chr.19:48865586 - 48906934 on Build GRCh38 | Gain | PLEKHA4 PPP1R15A NUCB1 TULP2 |
nsv833856 | Chr.19:48847866 - 48986483 on Build GRCh38 | Loss | PLEKHA4 PPP1R15A NUCB1 FTL NUCB1-AS1 TULP2 BAX GYS1 DHDH |
nsv833855 | Chr.19:48750098 - 48949781 on Build GRCh38 | Loss | PLEKHA4 HSD17B14 FGF21 PPP1R15A NUCB1 NUCB1-AS1 BCAT2 TULP2 DHDH FUT1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |