Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 17 - Intron 18 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | NP_848632.2 | ||
XM_017017654.1 | XP_016873143.1 | |||
AB089939.1 | BAD06471.1 | |||
AK057774.1 | BAB71566.1 | |||
BC131528.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | IFITM2 IFITM3 MIR210HG IRF7 LOC101059906 HRAS PGGHG RNH1 SIGIRR IFITM1 PHRF1 PTDSS2 MIR210 B4GALNT4 CDHR5 ANO9 IFITM5 LRRC56 LMNTD2 PKP3 RASSF7 LOC143666 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | MIR210HG IRF7 LOC101059906 HRAS MUC5B PANO1 EPS8L2 PNPLA2 DRD4 DEAF1 TSPAN4 B4GALNT4 MUC2 MUC5AC CHID1 PDDC1 LMNTD2 TMEM80 RNH1 AP2A2 SIGIRR LOC171391 PIDD1 MUC6 CRACR2B SLC25A22 SCT PHRF1 PTDSS2 POLR2L MIR210 CDHR5 LOC101927503 ANO9 MIR6744 TALDO1 RPLP2 CD151 CEND1 LRRC56 TOLLIP PKP3 SNORA52 RASSF7 LOC143666 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | B4GALNT4 ANO9 SIGIRR PKP3 |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | B4GALNT4 PKP3 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | PTDSS2 B4GALNT4 ANO9 RNH1 SIGIRR PKP3 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | B4GALNT4 ANO9 SIGIRR PKP3 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | MIR6743 IFITM2 IFITM3 SIRT3 PGGHG NLRP6 RIC8A SIGIRR IFITM1 BET1L PSMD13 PTDSS2 B4GALNT4 ODF3 ANO9 IFITM5 PKP3 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | PTDSS2 B4GALNT4 ANO9 SIGIRR PKP3 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | MIR210HG IRF7 LOC101059906 HRAS PANO1 EPS8L2 PNPLA2 DRD4 DEAF1 TSPAN4 B4GALNT4 CHID1 PDDC1 LMNTD2 TMEM80 RNH1 AP2A2 SIGIRR LOC171391 PIDD1 CRACR2B SLC25A22 SCT PHRF1 PTDSS2 POLR2L MIR210 CDHR5 ANO9 TALDO1 RPLP2 CD151 CEND1 LRRC56 PKP3 SNORA52 RASSF7 LOC143666 |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |