Assay Details
Target Gene Details
Entrez Gene ID: | 114897 |
Gene Name: | C1q and tumor necrosis factor related protein 1 |
Gene Aliases: |
CTRP1, GIP, ZSIG37 |
Location: |
Chr.17:79022934-79049788 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C1QTNF1 | NM_030968.3 | 1 | 282 | NP_112230.1 |
NM_153372.1 | NP_699203.1 | |||
NM_198594.2 | 1 | 282 | NP_940996.1 | |
XM_006721664.1 | 1 | 234 | XP_006721727.1 | |
XM_006721666.1 | 1 | 234 | XP_006721729.1 | |
AK055541.1 | 1 | 97 | BAB70947.1 | |
AY358424.1 | 1 | 248 | AAQ88790.1 | |
CD250839.1 | ||||
DA877694.1 | ||||
DA910618.1 | 1 | 282 |
Target Gene Details
Entrez Gene ID: | 100507410 |
Gene Name: | C1QTNF1 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.17:79019209-79027655 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C1QTNF1-AS1 | NR_040018.1 | |||
NR_040019.1 | ||||
DA938488.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv470610 | Chr.17:78973800 - 79091723 on Build GRCh38 | Loss | C1QTNF1-AS1 ENGASE CANT1 LGALS3BP C1QTNF1 RBFOX3 |
nsv523650 | Chr.17:78933797 - 79165563 on Build GRCh38 | Loss | C1QTNF1-AS1 ENGASE CANT1 LGALS3BP C1QTNF1 RBFOX3 |
nsv1057193 | Chr.17:78921031 - 79481744 on Build GRCh38 | Gain | C1QTNF1-AS1 TIMP2 ENGASE CANT1 LGALS3BP C1QTNF1 RBFOX3 |
More Information
Additional Information:
For this assay, SNP(s) [rs150083322] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |