Assay Details
Target Gene Details
Entrez Gene ID: | 8402 |
Gene Name: | solute carrier family 25 member 11 |
Gene Aliases: |
OGC, SLC20A4 |
Location: |
Chr.17:4937130-4940167 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 6 - Intron 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC25A11 | NM_001165417.1 | NP_001158889.1 | ||
NM_001165418.1 | NP_001158890.1 | |||
NM_003562.4 | NP_003553.2 | |||
AF070548.1 | AAC28637.1 | |||
AK290376.1 | ||||
AK313010.1 | ||||
BC006508.2 | AAH06508.1 | |||
BC006519.2 | AAH06519.1 | |||
BC016294.2 | AAH16294.1 | |||
BC017170.2 | AAH17170.1 | |||
BI752999.1 | ||||
BM047391.1 | ||||
CR456834.1 | CAG33115.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833350 | Chr.17:4884713 - 5060776 on Build GRCh38 | Loss | INCA1 MIR6864 C17orf107 MINK1 SLC25A11 CHRNE MIR6865 LOC102724009 KIF1C SLC52A1 RNF167 SPAG7 GP1BA PFN1 CAMTA2 ENO3 LOC101927979 |
esv3572365 | Chr.17:4874864 - 4942141 on Build GRCh38 | Gain | C17orf107 MINK1 GP1BA SLC25A11 CHRNE RNF167 |
nsv833349 | Chr.17:4853631 - 4991300 on Build GRCh38 | Loss | INCA1 MIR6864 C17orf107 MINK1 SLC25A11 CHRNE MIR6865 RNF167 SPAG7 GP1BA PFN1 CAMTA2 ENO3 LOC101927979 |
nsv574275 | Chr.17:4875192 - 4946479 on Build GRCh38 | Gain | C17orf107 MINK1 GP1BA SLC25A11 CHRNE PFN1 RNF167 |
nsv833347 | Chr.17:4785297 - 4955981 on Build GRCh38 | Loss | LOC107984973 C17orf107 MINK1 SLC25A11 CHRNE RNF167 VMO1 GP1BA PLD2 GLTPD2 PFN1 PSMB6 ENO3 |
dgv3088n100 | Chr.17:4868317 - 4942562 on Build GRCh38 | Gain | C17orf107 MINK1 GP1BA SLC25A11 CHRNE RNF167 |
nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain | ALOX15 ZNF594 LOC400568 C1QBP MIR6864 USP6 ARRB2 LOC107984973 C17orf107 MINK1 ZNF232 ZFP3 SLC25A11 CHRNE MIR6865 ZMYND15 SMTNL2 LOC102724009 KIF1C DHX33 SPAG7 VMO1 PLD2 NUP88 GLTPD2 PFN1 RABEP1 PSMB6 LOC101559451 ENO3 LOC101927979 INCA1 PELP1 MED11 LOC101928000 TM4SF5 SLC52A1 RNF167 SCIMP RPAIN GP1BA CXCL16 LOC100130950 CAMTA2 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |