Assay Details
Target Gene Details
Entrez Gene ID: | 283870 |
Gene Name: | BRICHOS domain containing 5 |
Gene Aliases: |
C16orf79 |
Location: |
Chr.16:2209253-2213037 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 4 - Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
BRICD5 | NM_182563.3 | NP_872369.2 | ||
XM_005255263.4 | XP_005255320.1 | |||
AY597811.1 | AAT09004.1 | |||
BC039154.2 | AAH39154.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv571200 | Chr.16:2209190 - 2244889 on Build GRCh38 | Loss | E4F1 MLST8 BRICD5 ECI1 PGP DNASE1L2 |
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | SNHG19 CACNA1H SSTR5 CEMP1 DDX11L10 UNKL LOC105371038 METTL26 PRSS29P LUC7L RHBDL1 SNORA64 IFT140 MIR3177 LOC101929280 GNG13 MIR6767 E4F1 HBA1 RGS11 LOC107987233 HAGHL PDPK1 ECI1 AMDHD2 SSTR5-AS1 RPUSD1 NTN3 NARFL SNORA78 NME4 CLCN7 WDR90 FAHD1 PRR25 PRR35 MIR6768 MPG MIR3176 MIR4516 MIR3180-5 MIR4717 MIR6859-4 NOXO1 RHBDF1 SOX8 TPSG1 LOC652276 NME3 RPS2 LOC107984876 SNORA10 MEIOB KCTD5 SLC9A3R2 ZNF598 HBQ1 MAPK8IP3 RPL3L LMF1 C16orf91 LOC100134368 BAIAP3 MLST8 BRICD5 PKD1 LMF1-AS1 ABCA17P NPW ERVK13-1 MRPL28 LOC729652 HS3ST6 LOC105371047 WASIR2 EME2 TRAF7 NTHL1 METRN HBA2 MIR3677 GFER UBE2I LOC105371046 RNF151 RPL23AP5 HAGH MRPS34 LINC00235 C16orf59 SYNGR3 ARHGDIG RAB26 CCDC78 PIGQ CCDC154 TSR3 RAB11FIP3 WFIKKN1 CAPN15 FBXL16 SNHG9 TBC1D24 NUBP2 MSLN TELO2 MIR5587 LINC00254 MCRIP2 CRAMP1 LOC105371184 MIR6511B1 SNRNP25 ATP6V0C NPRL3 LOC105371045 CASKIN1 WDR24 PGP C1QTNF8 TSC2 MIR1225 SNORD60 LOC105371049 FAM234A PTX4 RHOT2 GNPTG DECR2 TPSAB1 AXIN1 HBZ NHLRC4 TPSB2 IGFALS MSRB1 FLJ42627 NDUFB10 MIR662 MIR3178 PRSS27 RAB40C HBM CHTF18 STUB1 SPSB3 LOC100287175 TMEM204 TMEM8A POLR3K RNPS1 JMJD8 PDIA2 FAM173A TBL3 TPSD1 ABCA3 HN1L LOC106660606 MIR940 DNASE1L2 CCNF |
nsv471072 | Chr.16:1971892 - 2317508 on Build GRCh38 | Loss | SNHG19 TSC2 MIR1225 GFER SNORD60 LOC105371049 MIR4516 MIR3180-5 MIR4717 NOXO1 SYNGR3 RAB26 SLC9A3R2 ZNF598 E4F1 MLST8 BRICD5 PKD1 ECI1 RNPS1 NPW MIR6511B1 TBL3 ABCA3 TRAF7 NTHL1 LOC106660606 CASKIN1 MIR3677 MIR940 PGP DNASE1L2 |
dgv4861n54 | Chr.16:2083900 - 2246850 on Build GRCh38 | Loss | SNHG19 TSC2 MIR1225 E4F1 MLST8 BRICD5 SNORD60 PKD1 LOC105371049 MIR4516 MIR3180-5 ECI1 RAB26 MIR6511B1 TRAF7 CASKIN1 PGP DNASE1L2 |
dgv4863n54 | Chr.16:2141733 - 2274302 on Build GRCh38 | Loss | SNHG19 E4F1 MLST8 BRICD5 SNORD60 ECI1 RNPS1 RAB26 TRAF7 LOC106660606 CASKIN1 MIR3677 MIR940 PGP DNASE1L2 |
nsv1711 | Chr.16:2199093 - 2232650 on Build GRCh38 | Insertion | E4F1 MLST8 BRICD5 PGP |
nsv457351 | Chr.16:2156590 - 2274302 on Build GRCh38 | Loss | E4F1 MLST8 BRICD5 TRAF7 ECI1 LOC106660606 CASKIN1 RNPS1 MIR3677 MIR940 PGP DNASE1L2 |
nsv1052260 | Chr.16:2074546 - 2629655 on Build GRCh38 | Gain | SNHG19 TSC2 MIR6768 MIR1225 CEMP1 SNORD60 LOC105371049 MIR4516 MIR3180-5 MIR4717 C16orf59 LOC652276 RAB26 MIR3178 MIR6767 E4F1 MLST8 TBC1D24 BRICD5 PKD1 PDPK1 ECI1 AMDHD2 RNPS1 ABCA17P LOC729652 NTN3 MIR6511B1 ATP6V0C ABCA3 TRAF7 LOC106660606 CASKIN1 MIR3677 MIR940 PGP DNASE1L2 CCNF |
nsv952902 | Chr.16:2143400 - 2339999 on Build GRCh38 | Deletion | SNHG19 E4F1 MLST8 BRICD5 SNORD60 MIR4717 ECI1 RNPS1 RAB26 ABCA3 TRAF7 LOC106660606 CASKIN1 MIR3677 MIR940 PGP DNASE1L2 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |