Assay Details
Target Gene Details
Entrez Gene ID: | 10675 |
Gene Name: | chondroitin sulfate proteoglycan 5 |
Gene Aliases: |
NGC |
Location: |
Chr.3:47562238-47580240 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CSPG5 | NM_001206942.1 | 2 | 1398 | NP_001193871.1 |
NM_001206943.1 | 2 | 1320 | NP_001193872.1 | |
NM_001206944.1 | 2 | 1320 | NP_001193873.1 | |
NM_001206945.1 | 2 | 1398 | NP_001193874.1 | |
NM_006574.3 | 2 | 1320 | NP_006565.2 | |
AF059274.1 | 2 | 1150 | AAC69612.1 | |
AF461087.1 | 2 | 3243 | AAQ04774.1 | |
AF461088.1 | 1 | 1252 | AAQ04775.1 | |
AF461089.1 | 2 | 3243 | AAQ04776.1 | |
AK294621.1 | 2 | 1398 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv3807 | Chr.3:47558395 - 47607814 on Build GRCh38 | Insertion | SMARCC1 CSPG5 |
nsv428417 | Chr.3:46638962 - 47778557 on Build GRCh38 | Loss | PTPN23 CCDC12 KLHL18 MYL3 SCAP PRSS46 PRSS50 PRSS43 NRADDP PRSS45 TMIE SMARCC1 KIF9-AS1 PRSS42 KIF9 ELP6 CSPG5 ALS2CL SETD2 NBEAL2 SNORD13P3 PTH1R |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |