Hs01629775_cn

• Gene Symbol: SLC10A3
• Assay Reference Genome Location: Chr.X:154487297 on build GRCh38
• Cytoband: Xq28

Target Gene Details

• Entrez Gene ID: 8273
• Gene Name: solute carrier family 10 member 3
• Gene Aliases: DXS253E, P3
• Location: Chr.X:154487306-154490690 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC10A3	NM_001142391.2			NP_001135863.1
	NM_001142392.2			NP_001135864.1
	NM_019848.4			NP_062822.1
	XM_005277913.4			XP_005277970.1
	XM_006724847.3			XP_006724910.1
	XM_006724848.3			XP_006724911.1
	XM_011531200.2			XP_011529502.2
	XM_011531201.2			XP_011529503.1
	BC004966.1			AAH04966.1
	BM981524.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv33784	Chr.X:153962665 - 155699588 on Build GRCh38	Gain+Loss	DNASE1L1 MIR664B TMEM187 IKBKG IRAK1 TMLHE-AS1 BRCC3 VBP1 MIR6858 SNORA56 OPN1MW2 SPRY3 FAM50A MIR1184-1 FAM223A MIR718 F8A3 F8A2 H2AFB1 SLC10A3 SNORA70 LOC105373386 MECP2 EMD CTAG1B HCFC1 PLXNA3 CMC4 GAB3 DKC1 CTAG1A F8A1 MIR3202-2 FLNA OPN1MW TEX28 CH17-340M24.3 MTCP1 SMIM9 ATP6AP1 H2AFB2 MIR1184-3 TKTL1 UBL4A GDI1 H2AFB3 LOC107987332 TMLHE TAZ SNORA36A LOC101927830 MIR1184-2 FUNDC2 RPL10 CTAG2 MIR3202-1 RAB39B G6PD F8 FAM223B CLIC2 OPN1MW3 FAM3A OPN1LW LAGE3 HCFC1-AS1 MPP1
nsv519042	Chr.X:154082978 - 154601444 on Build GRCh38	Gain	DNASE1L1 IKBKG MIR6858 OPN1MW OPN1MW2 TEX28 FAM50A CH17-340M24.3 FAM223A ATP6AP1 TKTL1 SLC10A3 SNORA70 UBL4A GDI1 LOC105373386 LOC107987332 TAZ MECP2 EMD RPL10 PLXNA3 G6PD OPN1MW3 FAM3A CTAG1A OPN1LW LAGE3 FLNA
esv33199	Chr.X:153065734 - 154591978 on Build GRCh38	Gain+Loss	DNASE1L1 TMEM187 IKBKG MAGEA1 PNCK IRAK1 LOC107983954 MIR6858 OPN1MW2 FAM50A FAM223A MIR718 IDH3G RENBP L1CAM SLC10A3 BGN SNORA70 SSR4 LOC105373386 ZFP92 MECP2 PLXNB3 EMD PNMA6A SLC6A8 HCFC1 PLXNA3 CTAG1A PDZD4 MIR3202-2 FLNA SRPK3 HAUS7 OPN1MW TEX28 CH17-340M24.3 LCA10 FAM58A ATP6AP1 LOC105373381 TKTL1 UBL4A GDI1 LOC107987332 TAZ LOC105373383 ABCD1 TREX2 RPL10 ARHGAP4 MIR3202-1 BCAP31 LOC105373378 G6PD ATP2B3 ZNF275 OPN1MW3 FAM3A OPN1LW LAGE3 LOC105373377 NAA10 DUSP9 HCFC1-AS1 AVPR2

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

primary active transporter

Gene Ontology Categories:

Process(es)

bile acid and bile salt transport
response to retinoic acid
transmembrane transport

Function(s)

bile acid:sodium symporter activity