Assay Details
Target Gene Details
Entrez Gene ID: | 3991 |
Gene Name: | lipase E, hormone sensitive type |
Gene Aliases: |
AOMS4, FPLD6, HSL, LHS |
Location: |
Chr.19:42401507-42427426 on Build GRCh38 |
Assay Gene Location: | Within Exon 11 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LIPE | NM_005357.3 | 6 | 2149 | NP_005348.2 |
XM_005258937.3 | 6 | 2144 | XP_005258994.1 | |
XM_005258938.4 | 6 | 1135 | XP_005258995.1 | |
XM_005258939.3 | 7 | 1173 | XP_005258996.2 | |
XM_005258940.3 | 6 | 1074 | XP_005258997.1 | |
XM_006723218.2 | 6 | 1274 | XP_006723281.1 | |
XM_017026810.1 | 6 | 1014 | XP_016882299.1 | |
AK292482.1 | 6 | 2129 | ||
BC070041.1 | 6 | 2149 | AAH70041.1 | |
U40002.1 | 6 | 2149 | AAC50666.1 |
Target Gene Details
Entrez Gene ID: | 100996307 |
Gene Name: | LIPE antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.19:42397148-42652355 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LIPE-AS1 | NR_073180.1 | |||
AK311181.1 | ||||
DW455857.1 |
Target Gene Details
Entrez Gene ID: | 101930071 |
Gene Name: | uncharacterized LOC101930071 |
Gene Aliases: |
- |
Location: |
Chr.19:42397128-42408452 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC101930071 | NR_126041.1 | |||
BU566442.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv953584 | Chr.19:42387549 - 42412748 on Build GRCh38 | Deletion | LIPE-AS1 LOC101930071 LIPE CNFN |
nsv520239 | Chr.19:41853387 - 42426852 on Build GRCh38 | Loss | LIPE-AS1 MEGF8 MIR6797 MIR8077 ATP1A3 ZNF526 POU2F2 LOC100505622 MIR4323 TMEM145 GSK3A DEDD2 LOC101930071 ARHGEF1 RABAC1 CD79A LIPE CNFN ERF RPS19 PAFAH1B3 ZNF574 PRR19 GRIK5 LOC100505585 CIC LOC390937 |
nsv579632 | Chr.19:42400501 - 42408251 on Build GRCh38 | Gain | LIPE-AS1 LOC101930071 LIPE |
nsv526186 | Chr.19:42172329 - 42699355 on Build GRCh38 | Gain | LIPE-AS1 MEGF8 CEACAM8 MIR8077 LIPE CNFN ZNF526 ERF POU2F2 TMEM145 PAFAH1B3 CXCL17 GSK3A DEDD2 PRR19 LOC101930071 CEACAM1 CIC |
nsv522854 | Chr.19:41613927 - 42426852 on Build GRCh38 | Gain | CEACAM5 LIPE-AS1 MEGF8 MIR6797 MIR8077 CEACAM7 ATP1A3 ZNF526 POU2F2 CEACAM6 LOC100505622 MIR4323 TMEM145 GSK3A DEDD2 LOC101930071 ARHGEF1 RABAC1 LYPD4 CEACAM4 CD79A LIPE CNFN ERF RPS19 PAFAH1B3 ZNF574 PRR19 GRIK5 LOC100505585 CIC LOC390937 DMRTC2 CEACAM3 |
esv2422471 | Chr.19:42228989 - 43165333 on Build GRCh38 | Deletion | LIPE-AS1 MEGF8 CEACAM8 PSG10P MIR8077 LIPE CNFN PSG6 ERF PSG7 PSG3 TMEM145 PAFAH1B3 CXCL17 PSG1 GSK3A PRR19 LOC101930071 LOC100289650 CEACAM1 PSG11 CIC PSG8 PSG2 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |