Assay Details
Target Gene Details
Entrez Gene ID: | 58191 |
Gene Name: | C-X-C motif chemokine ligand 16 |
Gene Aliases: |
CXCLG16, SR-PSOX, SRPSOX |
Location: |
Chr.17:4733529-4739928 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CXCL16 | NM_001100812.1 | 1 | 298 | NP_001094282.1 |
NM_022059.3 | 1 | 298 | NP_071342.2 | |
AF301016.1 | 1 | 189 | AAG34365.1 | |
AK027389.1 | 1 | 216 | BAB55078.1 | |
AK292114.1 | 1 | 140 | ||
AK315017.1 | 1 | 298 | ||
AY358909.1 | 1 | 143 | AAQ89268.1 | |
BC017588.1 | 1 | 292 | AAH17588.1 | |
BC044930.1 | AAH44930.1 | |||
DC373874.1 | 1 | 298 | ||
JC209418.1 | 1 | 298 | ||
JC209420.1 | 1 | 298 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain | NUP88 RNF167 SCIMP RABEP1 LOC101928000 MED11 DHX33 PLD2 ALOX15 RPAIN SLC25A11 MIR6865 PELP1 LOC100130950 LOC400568 USP6 LOC107984973 TM4SF5 LOC102724009 ZFP3 ZMYND15 KIF1C ZNF232 SPAG7 SMTNL2 CXCL16 CAMTA2 ARRB2 C17orf107 ZNF594 GLTPD2 MINK1 C1QBP INCA1 PSMB6 PFN1 SLC52A1 VMO1 LOC101927979 GP1BA ENO3 MIR6864 LOC101559451 CHRNE |
nsv833346 | Chr.17:4646256 - 4860871 on Build GRCh38 | Loss | MED11 CXCL16 ARRB2 PLD2 GLTPD2 MINK1 PELP1 PSMB6 VMO1 LOC107984973 TM4SF5 ZMYND15 LOC101559451 |
nsv1952 | Chr.17:4726245 - 4748889 on Build GRCh38 | Insertion | MED11 CXCL16 ZMYND15 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |