Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
NM_032095.1 | NP_115266.1 | |||
AF152330.1 | AAD43724.1 | |||
AF152517.1 | AAD43777.1 | |||
BC103926.1 | AAI03927.1 | |||
BC103927.1 | AAI03928.1 | |||
BC103928.1 | AAI03929.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHA10 PCDHB17P PCDHA4 PCDHB15 PCDHGB6 PCDHA3 PCDHB8 PCDHB3 PCDHGA3 PCDHA12 LOC101926905 PCDHAC1 PCDHB13 PCDHB14 SLC25A2 PCDHA13 PCDHGA6 PCDHB5 PCDHB16 PCDHGA9 PCDHGA8 PCDHB12 PCDHAC2 PCDHA5 PCDHB4 PCDHA2 PCDHA7 PCDHA9 PCDHGB5 PCDHB11 PCDHGB8P PCDHGA11 PCDHGB2 PCDHGA5 PCDHB6 PCDHB10 PCDHGB7 PCDHA6 PCDHGB1 PCDHB18P PCDHA1 PCDHB2 PCDHA8 PCDHB7 PCDHGB4 TAF7 PCDHB19P PCDHGA2 PCDHA11 PCDHGB3 PCDHB1 PCDHGA4 PCDHGA1 PCDHB9 PCDHGA7 PCDHGA12 PCDHGA10 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGA9 PCDHGA8 PCDHGA2 PCDHGB5 PCDHGB6 PCDHGB3 PCDHGB4 PCDHGA4 PCDHGA1 PCDHGA3 PCDHGB2 PCDHGA5 PCDHGA7 PCDHGB1 PCDHGA10 PCDHGA6 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |