Assay Details
Target Gene Details
Entrez Gene ID: | 212 |
Gene Name: | 5'-aminolevulinate synthase 2 |
Gene Aliases: |
ALAS-E, ALASE, ANH1, ASB, SIDBA1, XLDPP, XLEPP, XLSA |
Location: |
Chr.X:55009055-55031064 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 4 - Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ALAS2 | NM_000032.4 | NP_000023.2 | ||
NM_001037967.3 | NP_001033056.1 | |||
NM_001037968.3 | NP_001033057.1 | |||
XM_005261995.3 | XP_005262052.1 | |||
XM_011530771.1 | XP_011529073.1 | |||
XM_017029354.1 | XP_016884843.1 | |||
AK290565.1 | ||||
AK291589.1 | ||||
AK313118.1 | ||||
BC030230.2 | ||||
BP233279.1 | ||||
BP284609.1 | ||||
X56352.1 | CAA39795.1 | |||
X60364.1 | CAA42916.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2740175 | Chr.X:52862926 - 55652533 on Build GRCh38 | Deletion | MIR6895 FGD1 MIRLET7F2 TRO APEX2 USP51 PAGE2B MAGED2 MIR6857 HSD17B10 ALAS2 FAM120C WNK3 SMC1A TSR2 SNORA11 XAGE3 MAGEH1 PAGE3 FAM104B HUWE1 PFKFB1 PAGE2 KDM5C MIR4536-2 TSPYL2 FAM156B FOXR2 KANTR ITIH6 MIR4536-1 MIR98 PHF8 SNORA109 PAGE5 LOC100421746 MTRNR2L10 GNL3L IQSEC2 GPR173 MIR6894 FAM156A RIBC1 |
nsv435891 | Chr.X:52861979 - 55653313 on Build GRCh38 | Deletion | MIR6895 FGD1 MIRLET7F2 TRO APEX2 USP51 PAGE2B MAGED2 MIR6857 HSD17B10 ALAS2 FAM120C WNK3 SMC1A TSR2 SNORA11 XAGE3 MAGEH1 PAGE3 FAM104B HUWE1 PFKFB1 PAGE2 KDM5C MIR4536-2 TSPYL2 FAM156B FOXR2 KANTR ITIH6 MIR4536-1 MIR98 PHF8 SNORA109 PAGE5 LOC100421746 MTRNR2L10 GNL3L IQSEC2 GPR173 MIR6894 FAM156A RIBC1 |
More Information
Additional Information:
For this assay, SNP(s) [rs150313977] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Non-exonic DGV Variation |