Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 5 - Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | NP_848632.2 | ||
XM_017017654.1 | XP_016873143.1 | |||
AB089939.1 | BAD06471.1 | |||
BC131528.1 | ||||
BF058197.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | IFITM1 CDHR5 PKP3 PHRF1 B4GALNT4 RNH1 HRAS LRRC56 IFITM5 LOC101059906 IFITM2 ANO9 MIR210 LOC143666 RASSF7 IFITM3 MIR210HG PTDSS2 SIGIRR IRF7 LMNTD2 PGGHG |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | PKP3 B4GALNT4 SIGIRR ANO9 |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | PKP3 B4GALNT4 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | PKP3 B4GALNT4 RNH1 PTDSS2 SIGIRR ANO9 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | PKP3 B4GALNT4 SIGIRR ANO9 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | IFITM1 PKP3 B4GALNT4 PSMD13 ODF3 BET1L MIR6743 IFITM5 IFITM2 ANO9 SIRT3 IFITM3 NLRP6 RIC8A PTDSS2 SIGIRR PGGHG |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | PKP3 B4GALNT4 PTDSS2 SIGIRR ANO9 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | RPLP2 PANO1 CDHR5 PKP3 B4GALNT4 RNH1 HRAS PNPLA2 TALDO1 TSPAN4 LRRC56 LOC101059906 EPS8L2 ANO9 PIDD1 MIR210HG IRF7 TMEM80 SLC25A22 CD151 PHRF1 SNORA52 LOC171391 CHID1 AP2A2 PDDC1 DRD4 MIR210 POLR2L DEAF1 LOC143666 RASSF7 CRACR2B SCT CEND1 PTDSS2 SIGIRR LMNTD2 |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |