Assay Details
Target Gene Details
Entrez Gene ID: | 634 |
Gene Name: | carcinoembryonic antigen related cell adhesion molecule 1 |
Gene Aliases: |
BGP, BGP1, BGPI |
Location: |
Chr.19:42507306-42528509 on Build GRCh38 |
Assay Gene Location: | Within Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CEACAM1 | NM_001024912.2 | 8 | 1895 | NP_001020083.1 |
NM_001184813.1 | 8 | 1660 | NP_001171742.1 | |
NM_001184815.1 | 9 | 1753 | NP_001171744.1 | |
NM_001184816.1 | 7 | 1607 | NP_001171745.1 | |
NM_001205344.1 | 8 | 1890 | NP_001192273.1 | |
NM_001712.4 | 9 | 1948 | NP_001703.2 | |
AL833584.1 | 8 | 1865 | ||
J03858.1 | 9 | 1894 | AAA51826.1 | |
X14831.1 | 8 | 1597 | CAA32940.1 | |
X16354.1 | 9 | 1885 | CAA34404.1 |
Target Gene Details
Entrez Gene ID: | 100996307 |
Gene Name: | LIPE antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.19:42397148-42652355 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LIPE-AS1 | NR_073179.1 | |||
NR_073180.1 | ||||
AK096849.1 | BAC04875.1 | |||
AK310497.1 | ||||
AK311181.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv526186 | Chr.19:42172329 - 42699355 on Build GRCh38 | Gain | PAFAH1B3 LIPE CEACAM1 POU2F2 MEGF8 GSK3A DEDD2 CEACAM8 TMEM145 CNFN CXCL17 CIC LOC101930071 PRR19 LIPE-AS1 MIR8077 ERF ZNF526 |
dgv15e196 | Chr.19:42487137 - 43165333 on Build GRCh38 | Deletion | CEACAM1 PSG11 PSG6 PSG3 PSG2 LIPE-AS1 PSG7 PSG1 PSG10P CEACAM8 LOC100289650 PSG8 |
esv2422471 | Chr.19:42228989 - 43165333 on Build GRCh38 | Deletion | PAFAH1B3 LIPE CEACAM1 PSG11 PSG6 PSG3 PSG2 MEGF8 PSG7 GSK3A PSG1 PSG10P CEACAM8 TMEM145 CNFN CXCL17 CIC LOC101930071 PRR19 LIPE-AS1 MIR8077 ERF LOC100289650 PSG8 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |