Assay Details
Target Gene Details
Entrez Gene ID: | 6275 |
Gene Name: | S100 calcium binding protein A4 |
Gene Aliases: |
18A2, 42A, CAPL, FSP1, MTS1, P9KA, PEL98 |
Location: |
Chr.1:153543619-153545806 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
S100A4 | NM_002961.2 | 2 | 129 | NP_002952.1 |
NM_019554.2 | 3 | 178 | NP_062427.1 | |
AK292083.1 | 2 | 129 | ||
AV735911.1 | ||||
BC000838.1 | 3 | 162 | AAH00838.1 | |
BC016300.1 | 2 | 133 | AAH16300.1 | |
CB109749.1 | 3 | 178 | ||
CR450345.1 | 1 | 60 | CAG29341.1 | |
M80563.1 | 2 | 195 | AAA51920.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv831603 | Chr.1:153433366 - 153603667 on Build GRCh38 | Gain | S100A3 S100A7 LOC101928034 S100A5 S100A7L2 S100A4 S100A2 S100A6 |
nsv1002705 | Chr.1:153335376 - 153553113 on Build GRCh38 | Gain | S100A3 S100A7 S100A8 LOC101928034 PGLYRP4 S100A9 S100A5 S100A7L2 S100A12 S100A4 S100A7A S100A6 |
esv3587591 | Chr.1:153528630 - 153570193 on Build GRCh38 | Gain | S100A3 LOC101928034 S100A5 S100A4 S100A2 S100A6 |
esv3587584 | Chr.1:153466126 - 153598991 on Build GRCh38 | Gain | S100A3 LOC101928034 S100A5 S100A4 S100A2 S100A6 |
More Information
Additional Information:
For this assay, SNP(s) [rs79910171] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |