Hs01392160_cn

• Gene Symbol: TCFL5
• Assay Reference Genome Location: Chr.20:62854033 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 10732
• Gene Name: transcription factor like 5
• Gene Aliases: CHA, E2BP-1, Figlb, bHLHe82
• Location: Chr.20:62841014-62861763 on Build GRCh38
• Assay Gene Location: Overlaps Intron 5 - Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TCFL5	NM_001301726.1			NP_001288655.1
	NM_006602.3			NP_006593.2
	XM_005260185.3			XP_005260242.1
	XM_011528497.2			XP_011526799.1
	XM_011528498.2			XP_011526800.1
	XM_011528499.1			XP_011526801.1
	AB012124.1			BAA36557.1
	AF070992.1			AAD53986.1
	AJ271337.1			CAC24700.1
	BC046933.1			AAH46933.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv834027	Chr.20:62707655 - 62874914 on Build GRCh38	Loss	LINC00659 TCFL5 NTSR1 COL9A3 MRGBP LOC107985428 OGFR LOC107987285 DPH3P1 OGFR-AS1
nsv828794	Chr.20:62832958 - 62880035 on Build GRCh38	Loss	TCFL5 COL9A3 DPH3P1 DIDO1
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	FNDC11 BHLHE23 LOC100130587 TCFL5 HAR1B LOC102723788 MIR3196 LOC107985425 OGFR-AS1 PPDPF LINC01056 NKAIN4 SRMS MRGBP KCNQ2 CHRNA4 DPH3P1 GID8 SLC17A9 PTK6 LINC00659 LOC63930 COL20A1 ARFGAP1 FLJ16779 OGFR GMEB2 BIRC7 LOC100130152 MIR4326 EEF1A2 COL9A3 HAR1A MIR124-3 LOC107985428 YTHDF1 HELZ2 LINC00029 DIDO1
nsv428380	Chr.20:62632018 - 62935383 on Build GRCh38	Loss	LINC00659 TCFL5 SLCO4A1 OGFR LOC107987285 SLCO4A1-AS1 OGFR-AS1 NTSR1 COL9A3 MRGBP LOC107985428 DPH3P1 DIDO1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor, gene-specific transcriptional regulator

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
multicellular organism development
spermatogenesis
cell differentiation
regulation of cell proliferation
regulation of cell differentiation

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
protein dimerization activity