Assay Details
Target Gene Details
Entrez Gene ID: | 8402 |
Gene Name: | solute carrier family 25 member 11 |
Gene Aliases: |
OGC, SLC20A4 |
Location: |
Chr.17:4937130-4940167 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC25A11 | NM_001165417.1 | NP_001158889.1 | ||
NM_001165418.1 | NP_001158890.1 | |||
NM_003562.4 | NP_003553.2 | |||
AF070548.1 | AAC28637.1 | |||
AK290376.1 | ||||
AK313010.1 | ||||
BC006508.2 | AAH06508.1 | |||
BC006519.2 | AAH06519.1 | |||
BC016294.2 | AAH16294.1 | |||
BC017170.2 | AAH17170.1 | |||
BI752999.1 | ||||
BM047391.1 | ||||
CB155476.1 | ||||
CR456834.1 | CAG33115.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833350 | Chr.17:4884713 - 5060776 on Build GRCh38 | Loss | LOC102724009 MIR6865 SLC25A11 KIF1C SLC52A1 PFN1 MIR6864 GP1BA LOC101927979 ENO3 MINK1 CAMTA2 CHRNE C17orf107 INCA1 SPAG7 RNF167 |
esv3572365 | Chr.17:4874864 - 4942141 on Build GRCh38 | Gain | MINK1 SLC25A11 CHRNE C17orf107 GP1BA RNF167 |
nsv833349 | Chr.17:4853631 - 4991300 on Build GRCh38 | Loss | MIR6865 SLC25A11 PFN1 MIR6864 GP1BA LOC101927979 ENO3 MINK1 CAMTA2 CHRNE C17orf107 INCA1 SPAG7 RNF167 |
nsv574275 | Chr.17:4875192 - 4946479 on Build GRCh38 | Gain | MINK1 SLC25A11 CHRNE C17orf107 PFN1 GP1BA RNF167 |
nsv833347 | Chr.17:4785297 - 4955981 on Build GRCh38 | Loss | GLTPD2 SLC25A11 PSMB6 PLD2 PFN1 GP1BA VMO1 ENO3 MINK1 CHRNE C17orf107 LOC107984973 RNF167 |
dgv3088n100 | Chr.17:4868317 - 4942562 on Build GRCh38 | Gain | MINK1 SLC25A11 CHRNE C17orf107 GP1BA RNF167 |
nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain | GLTPD2 LOC102724009 SCIMP CXCL16 PFN1 ARRB2 LOC100130950 ALOX15 LOC101927979 SMTNL2 ZFP3 RABEP1 ENO3 MINK1 CAMTA2 C1QBP DHX33 LOC107984973 LOC400568 MED11 MIR6865 LOC101559451 USP6 ZMYND15 SLC25A11 PSMB6 RPAIN PLD2 KIF1C SLC52A1 MIR6864 GP1BA NUP88 VMO1 CHRNE C17orf107 ZNF232 INCA1 PELP1 SPAG7 LOC101928000 TM4SF5 ZNF594 RNF167 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |