Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 20 - Exon 21 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | NP_848632.2 | ||
XM_017017654.1 | XP_016873143.1 | |||
AB089939.1 | BAD06471.1 | |||
AK057774.1 | BAB71566.1 | |||
BC131528.1 | ||||
CN348077.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | RASSF7 LOC101059906 PKP3 MIR210HG PGGHG SIGIRR IFITM3 RNH1 LOC143666 IFITM1 ANO9 HRAS LRRC56 MIR210 IFITM5 CDHR5 IRF7 PTDSS2 PHRF1 LMNTD2 B4GALNT4 IFITM2 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | PDDC1 LOC101059906 MIR210HG SIGIRR RNH1 EPS8L2 POLR2L ANO9 SNORA52 PNPLA2 CRACR2B TALDO1 LRRC56 MIR210 RPLP2 CDHR5 IRF7 LMNTD2 MIR6744 B4GALNT4 PIDD1 DEAF1 PANO1 AP2A2 CEND1 TSPAN4 LOC101927503 TOLLIP RASSF7 PKP3 MUC2 SLC25A22 DRD4 CD151 LOC143666 MUC6 HRAS TMEM80 CHID1 MUC5B LOC171391 SCT PTDSS2 PHRF1 MUC5AC |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | PKP3 SIGIRR B4GALNT4 ANO9 |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | PKP3 B4GALNT4 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | PKP3 SIGIRR RNH1 PTDSS2 B4GALNT4 ANO9 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | PKP3 SIGIRR B4GALNT4 ANO9 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | PKP3 PGGHG SIGIRR IFITM3 ODF3 IFITM1 ANO9 SIRT3 NLRP6 BET1L MIR6743 IFITM5 RIC8A PTDSS2 PSMD13 B4GALNT4 IFITM2 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | PKP3 SIGIRR PTDSS2 B4GALNT4 ANO9 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | PDDC1 LOC101059906 MIR210HG SIGIRR RNH1 EPS8L2 POLR2L ANO9 SNORA52 PNPLA2 CRACR2B TALDO1 LRRC56 MIR210 RPLP2 CDHR5 IRF7 LMNTD2 B4GALNT4 PIDD1 DEAF1 PANO1 AP2A2 CEND1 TSPAN4 RASSF7 PKP3 SLC25A22 DRD4 CD151 LOC143666 HRAS TMEM80 CHID1 LOC171391 SCT PTDSS2 PHRF1 |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |