Assay Details
Target Gene Details
Entrez Gene ID: | 7082 |
Gene Name: | tight junction protein 1 |
Gene Aliases: |
ZO-1 |
Location: |
Chr.15:29699367-29968919 on Build GRCh38 |
Assay Gene Location: | Within Exon 25 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TJP1 | NM_001301025.1 | 22 | 3612 | NP_001287954.1 |
NM_001301026.1 | 21 | 3387 | NP_001287955.1 | |
NM_003257.4 | 21 | 3848 | NP_003248.3 | |
NM_175610.3 | 20 | 3608 | NP_783297.2 | |
XM_005254617.3 | 22 | 3732 | XP_005254674.2 | |
XM_005254618.3 | 21 | 3479 | XP_005254675.1 | |
XM_005254619.3 | 21 | 3492 | XP_005254676.2 | |
XM_005254620.3 | 21 | 3492 | XP_005254677.2 | |
XM_011521972.2 | 22 | 3732 | XP_011520274.2 | |
XM_017022521.1 | 22 | 3732 | XP_016878010.1 | |
XM_017022522.1 | 22 | 3732 | XP_016878011.1 | |
XM_017022523.1 | 22 | 3732 | XP_016878012.1 | |
XM_017022524.1 | 21 | 3492 | XP_016878013.1 | |
XM_017022525.1 | 21 | 3494 | XP_016878014.1 | |
XM_017022526.1 | 21 | 3479 | XP_016878015.1 | |
XM_017022527.1 | 21 | 3520 | XP_016878016.1 | |
XM_017022528.1 | 21 | 3494 | XP_016878017.1 | |
XM_017022529.1 | 21 | 3479 | XP_016878018.1 | |
XM_017022530.1 | 20 | 3239 | XP_016878019.1 | |
XM_017022531.1 | 22 | 3562 | XP_016878020.1 | |
AB370197.1 | 20 | 3352 | ||
AK302971.1 | 2 | 413 | ||
AK304758.1 | 21 | 3479 | ||
AK308113.1 | 3 | 650 | ||
BC111712.1 | 21 | 3750 | AAI11713.1 | |
BX640879.1 | 21 | 3388 | CAE45936.1 | |
CR749235.1 | 13 | 2141 | CAH18091.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1040778 | Chr.15:28689598 - 30515727 on Build GRCh38 | Loss | APBA2 FAM189A1 CHRFAM7A LOC101060569 GOLGA8R TJP1 LOC100130111 GOLGA8M DKFZP434L187 LOC105370746 LOC107984752 GOLGA8T ULK4P3 WHAMMP2 LOC100289656 NSMCE3 LOC105370751 GOLGA8J PDCD6IPP2 GOLGA6L7P |
nsv832945 | Chr.15:29640395 - 29831518 on Build GRCh38 | Gain | TJP1 LOC100130111 |
esv2422463 | Chr.15:29710985 - 29923133 on Build GRCh38 | Duplication | TJP1 |
nsv527255 | Chr.15:28754022 - 30074044 on Build GRCh38 | Gain | APBA2 LOC107984752 FAM189A1 WHAMMP2 TJP1 LOC100289656 NSMCE3 LOC100130111 PDCD6IPP2 GOLGA6L7P |
esv2751526 | Chr.15:28724519 - 30687025 on Build GRCh38 | Loss | FAM189A1 TJP1 DKFZP434L187 LOC100288637 ARHGAP11B LOC105370746 GOLGA8T ULK4P3 LOC100996413 WHAMMP2 LOC100289656 NSMCE3 ULK4P2 GOLGA8J LOC101927579 GOLGA6L7P APBA2 CHRFAM7A LOC101060569 GOLGA8R LOC100130111 LOC107984752 LOC105370751 PDCD6IPP2 GOLGA8H |
nsv1039798 | Chr.15:28724126 - 30158154 on Build GRCh38 | Gain | APBA2 FAM189A1 TJP1 LOC100130111 LOC107984752 GOLGA8T ULK4P3 WHAMMP2 LOC100289656 NSMCE3 GOLGA8J PDCD6IPP2 GOLGA6L7P |
nsv568675 | Chr.15:29035149 - 29916451 on Build GRCh38 | Gain | APBA2 FAM189A1 TJP1 NSMCE3 LOC100130111 |
nsv832944 | Chr.15:29568858 - 29789854 on Build GRCh38 | Gain+Loss | FAM189A1 TJP1 LOC100130111 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |