Hs01197359_cn

• Gene Symbol: CHTF18
• Assay Reference Genome Location: Chr.16:791205 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 63922
• Gene Name: chromosome transmission fidelity factor 18
• Gene Aliases: C16orf41, C321D2.2, C321D2.3, C321D2.4, CHL12, Ctf18, RUVBL
• Location: Chr.16:788622-798074 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CHTF18	NM_022092.2			NP_071375.1
	XM_005255470.1			XP_005255527.1
	XM_005255471.3			XP_005255528.1
	XM_011522572.1			XP_011520874.1
	XM_011522573.1	1	59	XP_011520875.1
	XM_017023532.1			XP_016879021.1
	XM_017023533.1			XP_016879022.1
	XM_017023534.1			XP_016879023.1
	AK024476.1	7	1653	BAB15766.1
	AK128869.1	6	1236
	AK309804.1
	BC006278.2			AAH06278.2
	BC006437.1			AAH06437.1
	BC018184.1			AAH18184.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv4828n54	Chr.16:760143 - 828324 on Build GRCh38	Gain	MSLN GNG13 PRR25 CHTF18 MIR662 RPUSD1
esv3637582	Chr.16:751057 - 851536 on Build GRCh38	Gain	MSLN GNG13 PRR25 CHTF18 MIR662 RPUSD1
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	NHLRC4 IGFALS MIR3178 SNORA78 SNRNP25 FAM173A TPSB2 PGP PDPK1 NME3 MAPK8IP3 NPRL3 MIR3677 FLJ42627 MIR940 CLCN7 LINC00254 ZNF598 LOC105371045 MIR6859-4 HAGHL AMDHD2 MIR4717 SSTR5 BRICD5 MSRB1 RGS11 ARHGDIG LOC105371038 RPL23AP5 CAPN15 LOC105371046 NUBP2 MIR6768 HBZ LMF1-AS1 C16orf59 GNPTG JMJD8 MIR5587 MLST8 RHOT2 SNORA64 PRR25 TELO2 ABCA3 DECR2 RNF151 CCDC154 TSR3 RPUSD1 FBXL16 PTX4 IFT140 LUC7L MIR3176 LOC105371047 LINC00235 LOC729652 CHTF18 SNORD60 TBL3 MEIOB E4F1 MIR4516 TMEM204 MIR662 UNKL RAB26 SNHG9 LOC107987233 C1QTNF8 SOX8 HBM RAB11FIP3 HBA2 WDR90 NTN3 HAGH MIR6767 SSTR5-AS1 NTHL1 CRAMP1 LOC105371184 MSLN HN1L GNG13 RPL3L NPW TRAF7 DDX11L10 PDIA2 NARFL EME2 CCNF MIR6511B1 CEMP1 FAM234A WFIKKN1 LOC100134368 FAHD1 RHBDF1 WDR24 HBA1 CASKIN1 UBE2I METRN GFER TMEM8A SLC9A3R2 PIGQ CACNA1H NDUFB10 LOC652276 LOC105371049 HBQ1 RHBDL1 ERVK13-1 ATP6V0C TPSD1 TPSAB1 AXIN1 MIR3177 METTL26 KCTD5 ECI1 CCDC78 MRPL28 STUB1 RAB40C C16orf91 LOC101929280 NME4 HS3ST6 WASIR2 TSC2 MPG ABCA17P RPS2 NOXO1 LOC107984876 SNHG19 SNORA10 LOC100287175 LOC106660606 MIR1225 PRR35 SYNGR3 POLR3K MRPS34 PRSS29P RNPS1 SPSB3 MCRIP2 PKD1 PRSS27 LMF1 TBC1D24 TPSG1 BAIAP3 MIR3180-5 DNASE1L2
nsv471063	Chr.16:520623 - 852322 on Build GRCh38	Loss	MIR5587 CCDC78 RHOT2 NHLRC4 STUB1 PRR25 WDR90 FAM173A RAB40C RPUSD1 LOC101929280 LOC105371184 FBXL16 MSLN GNG13 HAGHL MIR3176 LINC00235 NARFL CHTF18 WFIKKN1 LOC100287175 WDR24 LOC105371038 MIR662 CAPN15 PRR35 METRN PIGQ LOC107987233 MCRIP2 RHBDL1 JMJD8 RAB11FIP3 METTL26
nsv526903	Chr.16:451362 - 810673 on Build GRCh38	Loss	MIR5587 CCDC78 RHOT2 NHLRC4 STUB1 PRR25 WDR90 FAM173A RAB40C RPUSD1 LOC101929280 LOC105371184 FBXL16 MSLN GNG13 HAGHL MIR3176 LINC00235 NARFL CHTF18 WFIKKN1 LOC100287175 WDR24 LOC105371038 MIR662 CAPN15 PRR35 METRN PIGQ LOC107987233 MCRIP2 RHBDL1 JMJD8 RAB11FIP3 METTL26
nsv952898	Chr.16:495001 - 1132900 on Build GRCh38	Deletion	MIR5587 CCDC78 RHOT2 NHLRC4 STUB1 PRR25 WDR90 FAM173A SSTR5-AS1 RAB40C RPUSD1 LOC101929280 LOC105371184 FBXL16 MSLN GNG13 HAGHL MIR3176 LINC00235 NARFL SSTR5 LOC107984876 CHTF18 WFIKKN1 LOC100287175 WDR24 LOC105371038 MIR662 CAPN15 PRR35 METRN PIGQ LOC107987233 LMF1-AS1 MCRIP2 RHBDL1 LMF1 JMJD8 C1QTNF8 SOX8 RAB11FIP3 METTL26
nsv571044	Chr.16:790409 - 796798 on Build GRCh38	Loss	CHTF18
nsv571042	Chr.16:785298 - 847566 on Build GRCh38	Loss	GNG13 PRR25 CHTF18 RPUSD1
nsv1160326	Chr.16:580902 - 804689 on Build GRCh38	Duplication	CCDC78 RHOT2 STUB1 WDR90 FAM173A RAB40C RPUSD1 LOC101929280 LOC105371184 FBXL16 MSLN GNG13 HAGHL NARFL CHTF18 WFIKKN1 LOC100287175 WDR24 LOC105371038 MIR662 METRN PIGQ MCRIP2 RHBDL1 JMJD8 METTL26
nsv571043	Chr.16:787857 - 798755 on Build GRCh38	Loss	GNG13 CHTF18 RPUSD1
nsv1160325	Chr.16:506925 - 836376 on Build GRCh38	Duplication	MIR5587 CCDC78 RHOT2 NHLRC4 STUB1 PRR25 WDR90 FAM173A RAB40C RPUSD1 LOC101929280 LOC105371184 FBXL16 MSLN GNG13 HAGHL MIR3176 LINC00235 NARFL CHTF18 WFIKKN1 LOC100287175 WDR24 LOC105371038 MIR662 CAPN15 PRR35 METRN PIGQ LOC107987233 MCRIP2 RHBDL1 JMJD8 RAB11FIP3 METTL26
nsv571040	Chr.16:774098 - 797597 on Build GRCh38	Loss	CHTF18 RPUSD1
nsv9321	Chr.16:638149 - 804328 on Build GRCh38	Gain+Loss	CCDC78 RHOT2 NARFL STUB1 WDR90 CHTF18 FAM173A LOC100287175 WDR24 LOC105371038 MIR662 RPUSD1 LOC105371184 METRN FBXL16 MSLN GNG13 MCRIP2 RHBDL1 HAGHL JMJD8
nsv571045	Chr.16:790597 - 847566 on Build GRCh38	Gain	GNG13 PRR25 CHTF18
dgv4827n54	Chr.16:760039 - 810673 on Build GRCh38	Loss	MSLN GNG13 PRR25 CHTF18 MIR662 RPUSD1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)

DNA replication
cell cycle
positive regulation of DNA-directed DNA polymerase activity

Function(s)

DNA clamp loader activity
protein binding
ATP binding
single-stranded DNA-dependent ATPase activity