Assay Details
Target Gene Details
Entrez Gene ID: | 3029 |
Gene Name: | hydroxyacylglutathione hydrolase |
Gene Aliases: |
GLO2, GLX2, GLXII, HAGH1 |
Location: |
Chr.16:1809099-1827194 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HAGH | NM_001040427.1 | NP_001035517.1 | ||
NM_001286249.1 | NP_001273178.1 | |||
NM_005326.4 | NP_005317.2 | |||
XM_011522469.2 | XP_011520771.1 | |||
XM_011522470.2 | XP_011520772.1 | |||
XM_017023195.1 | XP_016878684.1 | |||
AK290155.1 | ||||
AK298174.1 | ||||
AK299173.1 | ||||
AK299993.1 | ||||
AK308825.1 | ||||
BC000840.1 | AAH00840.1 | |||
BC002627.2 | ||||
BG703401.1 | ||||
BI758286.1 | ||||
BU176541.1 | ||||
DB502986.1 | ||||
DR006636.1 | ||||
X90999.1 | CAA62483.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv517196 | Chr.16:1729694 - 1844960 on Build GRCh38 | Gain+Loss | MIR3177 IGFALS NUBP2 MRPS34 EME2 SPSB3 FAHD1 MAPK8IP3 NME3 HAGH MEIOB |
nsv571175 | Chr.16:1806439 - 1875278 on Build GRCh38 | Loss | FAHD1 HAGH MEIOB |
nsv1040440 | Chr.16:1811739 - 1866102 on Build GRCh38 | Gain | FAHD1 HAGH MEIOB |
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | LMF1 PTX4 MIR4516 MCRIP2 MIR3677 RPS2 FAHD1 MAPK8IP3 ATP6V0C HBZ MSRB1 MEIOB DECR2 KCTD5 MRPS34 UBE2I SPSB3 RHBDL1 DNASE1L2 HBA2 MRPL28 GFER SNORA10 CRAMP1 IFT140 MPG MIR6859-4 MIR1225 SNORA78 FAM173A CLCN7 WASIR2 FAM234A LMF1-AS1 SNHG9 RHOT2 METTL26 UNKL NPRL3 TMEM8A BAIAP3 MIR3178 RNPS1 SNORA64 MIR940 STUB1 RAB26 IGFALS AXIN1 SOX8 TPSD1 SSTR5-AS1 PDPK1 SNRNP25 NARFL SSTR5 RPL3L HBM MLST8 SNHG19 LOC105371045 PRR25 PDIA2 HS3ST6 RAB40C WFIKKN1 LOC105371046 RGS11 PGP LOC107987233 CCDC154 MIR6511B1 CHTF18 CASKIN1 HN1L WDR24 NUBP2 NTHL1 NME3 LINC00254 PKD1 MIR6767 DDX11L10 TPSB2 FBXL16 HBQ1 HBA1 EME2 NME4 E4F1 ECI1 TPSG1 TPSAB1 ABCA17P HAGH PRSS29P MIR662 SYNGR3 MIR3177 SNORD60 PRSS27 RAB11FIP3 LINC00235 MIR6768 JMJD8 FLJ42627 GNG13 NTN3 RPL23AP5 TMEM204 C1QTNF8 MIR5587 LOC107984876 C16orf59 BRICD5 LOC652276 CCNF NHLRC4 TSC2 MIR4717 RNF151 LOC105371184 RPUSD1 SLC9A3R2 WDR90 GNPTG LOC105371049 LOC729652 MSLN C16orf91 PIGQ TBL3 LOC106660606 CAPN15 ZNF598 TRAF7 METRN LOC105371047 LOC100134368 CCDC78 MIR3180-5 MIR3176 NOXO1 POLR3K NDUFB10 ERVK13-1 ARHGDIG TBC1D24 AMDHD2 CACNA1H ABCA3 LOC105371038 LOC101929280 PRR35 TSR3 LUC7L NPW LOC100287175 CEMP1 RHBDF1 TELO2 HAGHL |
nsv1051692 | Chr.16:1505070 - 1866102 on Build GRCh38 | Loss | LOC105371047 MIR3177 HN1L NUBP2 FAHD1 MAPK8IP3 NME3 CRAMP1 MEIOB IFT140 TMEM204 IGFALS MRPS34 EME2 SPSB3 LOC105371046 HAGH TELO2 |
nsv1042986 | Chr.16:1784723 - 1866102 on Build GRCh38 | Loss | IGFALS NUBP2 FAHD1 HAGH MEIOB |
nsv518641 | Chr.16:1645775 - 1835631 on Build GRCh38 | Loss | MIR3177 HN1L NUBP2 FAHD1 MAPK8IP3 NME3 CRAMP1 MEIOB IGFALS MRPS34 EME2 SPSB3 HAGH |
nsv457337 | Chr.16:1813519 - 1855005 on Build GRCh38 | Loss | FAHD1 HAGH MEIOB |
nsv952900 | Chr.16:1724500 - 1827999 on Build GRCh38 | Deletion | MIR3177 IGFALS NUBP2 MRPS34 EME2 SPSB3 FAHD1 MAPK8IP3 NME3 HAGH |
nsv571177 | Chr.16:1817039 - 1897015 on Build GRCh38 | Gain | FAHD1 LINC00254 HAGH MEIOB |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |