Hs01183326_cn

• Gene Symbol: SLC10A3
• Assay Reference Genome Location: Chr.X:154489073 on build GRCh38
• Cytoband: Xq28

Target Gene Details

• Entrez Gene ID: 8273
• Gene Name: solute carrier family 10 member 3
• Gene Aliases: DXS253E, P3
• Location: Chr.X:154487306-154490690 on Build GRCh38
• Assay Gene Location: Overlaps Exon 3 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC10A3	NM_001142391.2			NP_001135863.1
	NM_001142392.2			NP_001135864.1
	NM_019848.4			NP_062822.1
	XM_005277913.4			XP_005277970.1
	XM_006724847.3			XP_006724910.1
	XM_006724848.3			XP_006724911.1
	XM_011531200.2			XP_011529502.2
	XM_011531201.2			XP_011529503.1
	BC004966.1			AAH04966.1
	BG327309.1
	BP281642.1
	BX401493.2
	DB460327.1
	HY098516.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv33784	Chr.X:153962665 - 155699588 on Build GRCh38	Gain+Loss	CH17-340M24.3 RAB39B MIR718 CTAG2 LOC107987332 SPRY3 UBL4A RPL10 PLXNA3 HCFC1 SMIM9 LAGE3 DNASE1L1 CTAG1B CTAG1A FLNA FAM50A BRCC3 FAM3A TEX28 FAM223A TAZ IRAK1 HCFC1-AS1 F8A2 F8A1 TMLHE OPN1MW SNORA36A F8A3 OPN1LW GDI1 CLIC2 CMC4 MPP1 LOC101927830 H2AFB2 MTCP1 MIR3202-2 SNORA56 MIR3202-1 OPN1MW3 GAB3 FAM223B MECP2 IKBKG OPN1MW2 TMEM187 G6PD MIR1184-1 MIR1184-2 SNORA70 SLC10A3 ATP6AP1 LOC105373386 DKC1 TKTL1 MIR1184-3 TMLHE-AS1 VBP1 EMD F8 FUNDC2 H2AFB1 MIR6858 MIR664B H2AFB3
nsv519042	Chr.X:154082978 - 154601444 on Build GRCh38	Gain	CH17-340M24.3 LOC107987332 OPN1MW3 UBL4A RPL10 PLXNA3 MECP2 IKBKG OPN1MW2 LAGE3 DNASE1L1 CTAG1A FLNA G6PD FAM50A FAM3A SNORA70 SLC10A3 TEX28 ATP6AP1 LOC105373386 FAM223A TAZ TKTL1 OPN1MW EMD OPN1LW GDI1 MIR6858
esv33199	Chr.X:153065734 - 154591978 on Build GRCh38	Gain+Loss	CH17-340M24.3 LOC107983954 PNCK MIR718 DUSP9 LOC107987332 ZFP92 UBL4A RPL10 PLXNA3 BGN IDH3G HCFC1 HAUS7 LAGE3 DNASE1L1 CTAG1A FLNA LOC105373377 FAM50A FAM3A ABCD1 LOC105373383 TEX28 FAM223A ATP2B3 TAZ IRAK1 SRPK3 HCFC1-AS1 SSR4 OPN1MW SLC6A8 LCA10 OPN1LW GDI1 AVPR2 BCAP31 PNMA6A MIR3202-2 MIR3202-1 OPN1MW3 PLXNB3 RENBP MECP2 IKBKG OPN1MW2 FAM58A MAGEA1 TMEM187 LOC105373381 ZNF275 G6PD ARHGAP4 SNORA70 SLC10A3 ATP6AP1 LOC105373386 TREX2 TKTL1 PDZD4 L1CAM EMD LOC105373378 NAA10 MIR6858

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

primary active transporter

Gene Ontology Categories:

Process(es)

bile acid and bile salt transport
response to retinoic acid
transmembrane transport

Function(s)

bile acid:sodium symporter activity