Assay Details
Target Gene Details
Entrez Gene ID: | 51095 |
Gene Name: | tRNA nucleotidyl transferase 1 |
Gene Aliases: |
CCA1, CGI-47, MtCCA, RPEM, SIFD |
Location: |
Chr.3:3126916-3153435 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TRNT1 | NM_001302946.1 | 8 | 1177 | NP_001289875.1 |
NM_182916.2 | 8 | 1237 | NP_886552.2 | |
XM_011533776.2 | 8 | 1235 | XP_011532078.1 | |
XM_011533777.2 | 8 | 1483 | XP_011532079.1 | |
XM_011533778.2 | 8 | 1237 | XP_011532080.1 | |
AB063105.1 | 8 | 1180 | BAB70662.1 | |
AF151805.1 | 8 | 1179 | AAD34042.1 | |
AK290411.1 | 8 | 1202 | ||
AL834397.1 | 8 | 1141 | CAD39059.1 | |
BQ722111.1 | ||||
DA884423.1 | 3 | 383 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv589371 | Chr.3:2170634 - 3594980 on Build GRCh38 | Loss | CNTN4 CRBN IL5RA LOC100130207 CNTN4-AS1 TRNT1 |
esv2751994 | Chr.3:2200757 - 3178886 on Build GRCh38 | Gain | CNTN4 CRBN IL5RA CNTN4-AS1 TRNT1 |
esv2422274 | Chr.3:2100396 - 3314907 on Build GRCh38 | Duplication | CNTN4 CRBN IL5RA LOC100130207 CNTN4-AS1 TRNT1 CNTN4-AS2 |
nsv521796 | Chr.3:3038825 - 3151219 on Build GRCh38 | Loss | CNTN4 CRBN IL5RA CNTN4-AS1 TRNT1 |
dgv4636n100 | Chr.3:2825734 - 3271845 on Build GRCh38 | Gain | CNTN4 CRBN IL5RA LOC100130207 CNTN4-AS1 TRNT1 |
nsv834604 | Chr.3:3147083 - 3361983 on Build GRCh38 | Gain | CRBN LOC100130207 TRNT1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |