Assay Details
Target Gene Details
Entrez Gene ID: | 25861 |
Gene Name: | whirlin |
Gene Aliases: |
CIP98, DFNB31, PDZD7B, USH2D, WI |
Location: |
Chr.9:114402078-114505509 on Build GRCh38 |
Assay Gene Location: | Within Exon 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
WHRN | NM_001083885.2 | 12 | 2493 | NP_001077354.2 |
NM_001173425.1 | 12 | 3654 | NP_001166896.1 | |
NM_015404.3 | 12 | 3657 | NP_056219.3 | |
XM_011518484.1 | 13 | 3743 | XP_011516786.1 | |
XM_011518485.1 | 14 | 3591 | XP_011516787.1 | |
XM_011518486.1 | 13 | 3740 | XP_011516788.1 | |
XM_011518487.1 | 12 | 3617 | XP_011516789.1 | |
XM_011518488.1 | 11 | 3500 | XP_011516790.1 | |
XM_011518495.1 | 10 | 1995 | XP_011516797.1 | |
AB040959.1 | 12 | 3171 | ||
AK022854.1 | 8 | 2371 | BAB14275.1 | |
AL110228.1 | 12 | 2451 | CAB53685.2 | |
BC136416.1 | ||||
BC142614.1 | 12 | 3657 | ||
BC142684.1 | 12 | 3632 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv948n27 | Chr.9:114193988 - 114693895 on Build GRCh38 | Gain | WHRN COL27A1 AKNA ATP6V1G1 MIR455 ORM1 TMEM268 ORM2 LOC100505478 |
dgv7706n100 | Chr.9:114182745 - 114697870 on Build GRCh38 | Gain | WHRN COL27A1 AKNA ATP6V1G1 MIR455 ORM1 TMEM268 ORM2 LOC100505478 |
nsv831693 | Chr.9:114354170 - 114519615 on Build GRCh38 | Gain | WHRN AKNA |
dgv33e196 | Chr.9:114030664 - 114604363 on Build GRCh38 | Duplication | WHRN COL27A1 KIF12 AKNA ZNF618 ATP6V1G1 MIR455 ORM1 TMEM268 ORM2 AMBP |
nsv615233 | Chr.9:114167820 - 114486199 on Build GRCh38 | Gain | WHRN COL27A1 AKNA MIR455 ORM1 ORM2 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |