Assay Details
Target Gene Details
Entrez Gene ID: | 388428 |
Gene Name: | AATK antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.17:81165507-81183164 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AATK-AS1 | NR_027255.1 | 3 | 478 | |
AK126811.1 | 3 | 478 | BAC86704.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv26223 | Chr.17:80659041 - 81736487 on Build GRCh38 | Gain+Loss | AATK-AS1 BAIAP2 BAHCC1 RPTOR MIR3065 TSPAN10 OXLD1 MIR4740 CHMP6 LINC00482 NPLOC4 LOC101928855 PDE6G LOC107985021 CEP131 LOC100129503 MRPL12 C17orf89 HGS FAAP100 ACTG1 LOC105371925 MIR657 LOC400627 AATK MIR338 SLC25A10 FSCN2 LOC107985022 ARL16 MIR1250 LOC105371921 MIR6786 TEPSIN TMEM105 LOC100130370 CCDC137 MIR3186 SLC38A10 BAIAP2-AS1 |
nsv1057306 | Chr.17:81154954 - 81207813 on Build GRCh38 | Loss | AATK-AS1 CEP131 AATK |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | AATK-AS1 NOTUM TEX19 MYADML2 MIR6787 ALYREF RAC3 FN3K LINC00482 NPLOC4 LRRC45 ASPSCR1 MCRIP1 PDE6G FOXK2 OGFOD3 LOC105376791 C17orf89 HEXDC LOC105371944 DCXR SECTM1 CD7 LOC105371925 TBCD ARHGDIA CSNK1D MAFG SIRT7 AATK RFNG FSCN2 ARL16 PYCR1 MAFG-AS1 TEPSIN TMEM105 WDR45B ZNF750 MIR4525 UTS2R STRA13 BAHCC1 TSPAN10 OXLD1 PCYT2 MIR4740 NARF B3GNTL1 CEP131 RAB40B LOC101929511 SLC16A3 MRPL12 HGS FAAP100 ACTG1 GPS1 LOC101929552 SNORD134 ANAPC11 SLC25A10 FASN P4HB PPP1R27 LOC105376790 FN3KRP C17orf62 MIR6786 NPB LOC100130370 DUS1L CCDC137 GCGR MIR3186 CCDC57 SLC38A10 |
dgv46n68 | Chr.17:81133921 - 81288932 on Build GRCh38 | Loss | AATK-AS1 LOC105371925 TEPSIN CEP131 AATK C17orf89 SLC38A10 |
nsv1065052 | Chr.17:81080876 - 81204920 on Build GRCh38 | Gain | AATK-AS1 BAIAP2 MIR657 MIR3065 CEP131 AATK MIR338 MIR1250 |
nsv470619 | Chr.17:81032233 - 81349843 on Build GRCh38 | Loss | AATK-AS1 BAIAP2 LOC105371925 MIR657 MIR3065 LINC00482 AATK MIR338 MIR1250 TEPSIN TMEM105 CEP131 C17orf89 SLC38A10 BAIAP2-AS1 |
dgv3292n100 | Chr.17:81019582 - 81204920 on Build GRCh38 | Gain | AATK-AS1 BAIAP2 MIR657 MIR3065 CEP131 AATK MIR338 MIR1250 BAIAP2-AS1 |
nsv1064123 | Chr.17:81168449 - 81282457 on Build GRCh38 | Gain | AATK-AS1 LOC105371925 TEPSIN CEP131 C17orf89 SLC38A10 |
nsv952389 | Chr.17:81137501 - 81593774 on Build GRCh38 | Deletion | AATK-AS1 LOC105371925 BAHCC1 MIR4740 LINC00482 NPLOC4 AATK FSCN2 TEPSIN TMEM105 CEP131 LOC100130370 C17orf89 MIR3186 FAAP100 ACTG1 SLC38A10 |
nsv1066947 | Chr.17:81094837 - 81181290 on Build GRCh38 | Loss | AATK-AS1 BAIAP2 MIR657 MIR3065 AATK MIR338 MIR1250 |
More Information
Additional Information:
For this assay, SNP(s) [rs112222853] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |